Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01943 ATGCCGTTCAACATAACATCTATCAAAACATCCTCTAATGGAGTGTGGCAAGGTGATAATCCTTTAGACTATGCCTTCCCACTCCTAACACTTCAAATCATCTTAGTCCTCATCGTCACTCGCTCCCTCGCTTTACTTCTCAAACCTCTCCGACAACCCAAAGTCATTGCTGAGATTCTGGGTGGAGTTTTGCTGGGGCCATCGGCACTGGGAAGAAACAAAAGTTATTTGCATCGTATGTTCCCTTCATGGAGCACGCCAACACTGGAATCCGTAGCAAGCATAGGTCTTCTTTTTTTCCTATTCCTCGTAGGTTTGGAGCTCGATCTCAATTCCATTCGCCGGAGCGGAAAAAGAGCCTTCAGCATCGCAGCCGTCGGGATCACTCTTCCTTTCGTCTGCGGCATCGGCGTCGCCGTCGTCCTCCGCAAAACAGTGGACGGCGCAGACGAGCCCGGCTTCGCGCAGTTCATCGTCTTCATGGGCGTGGCGCTTTCCATCACTGCATTCCCGGTACTGGCGCGCATCCTGGCGGAGCTGAAGCTCCTCACGACGCGCGTGGGGGAGACCGCGATGGCGGCGGCGGCGTTCAATGACGTAGTAGCGTGGATCCTACTCGCGCTGGCAGTGGCTCTGGCGGGCAACGGCAGCGGGTCCCACAAGAGTCCTCTGGTATCGGTGTGGGTTCTGCTATCGGGGCTGGCGTTCGTGGTTTTCATGATGGTGGCTGTCCGACCGGCGATGGCGGTTGTGGCAAGGAAGGGCGAAAACGACGCGACTGACGAGTTTTATGTTTGTTTGACGCTGGCGGGTGTTTTAGTATCGGGGTTTATGACGGACCTGATCGGGATTCACTCTATATTCGGGGCCTTCGTATTTGGGTTAACGATTCCAAAGGAGGGAAACTTCGCGAAGAAGCTAACGGAGAGAATCGAGGATTTTGTTTTAGGTTTGTTGCTCCCACTCTACTTTGCCTCTAGCGGCTTGAAAACCGATGTAACTACCATACGTGGCGCTTCCGCGTGGGGGCTTCTGGTTCTGGTCATAGCCACGGCTTGTGCTGGGAAAATTCTAGGCACCTTCGCCGTCGCCATGTTCTGCATGATCCCCGCCAGAGAATCTCTCACACTTGGCTTTCTCATGAACACCAAAGGCCTCGTTGAGCTCATCGTACTCAACATTGGAAGGGAAAAAAAGGTTTTAAATGCTGAAATGTTTGCAATTTTAGTTCTTATGGCTCTATTCACTACCTTCATCACGACACCAATAGTGATGGCCATCTATAAACCAGCTCGAGGGAACTCAATGAAAGCCCCGCGGAAGCTAGGTGACAGTTCCCGGGGTTCTAGGGATGAAGGGGTTGAGAAGTTCAGAGTCTTGGCATGTCTCCATGGGCCAGCCAATATCCCTTCTATCATAAATTTGATTGAATCAACTCGAAGCACAAAAAAGTCCTTCATAAAGTTGTTCATGATGCACCTTGTTGAGCTCACAGAGCGTTCATCCTCTATCATCATGGTTCATCGTGCCCGTAGGAATGGTTTCCCTTTCTTCAACCGCTCCCATCGTGACCAGTGGCATGACCGAATTGCAGGAGCTTTTCAAGCCTACAGTCAACTAGGCCGAGTCATGGTTCGCTCCACAACCACTCTCTCTTCTCTCTCCACCATGCATGAGGACATCTGCCACGTGGCGGAGGAGAAAACGGTGACCATGATTATTTTGCCCTTCCACAAACACTGGAGGACAGAAGTGAATGGGGACAACCAGAAATATCAAGTGGTAGAAAACGCAGGCCACGAATGGAGAGTGACGAACCAGAAGGTACTTATGAATGCACCTTGCTCGGTGGTCGTGCTTGTGGATCGTGGATATGGTAATTTGCCACAAACTCCAATCCCAAATTCCATTGTTTCCCAACGAGTGTGCATCATCTTCTTCGGTGGCCCAGATGATCGTGAAGCTCTAGAGTTGGGGAAGAAGATGGTTGAACACCCAACAGTTAAAGTAAGTGTTGTAAGGTTTATTGAAAAGGATGGGTTGGATGAGAATAACATCGTGTTAAGCTTCTCACCTGGCCAAAACAACGACGAAAGTTACAGCTTCTCCACTGTCAAAGTGAATCGCCAGAAAGAAAGGGAGTTGGATGAGGAGGCAATTAAAGAGTTTAAAAGCAAGTTGAATGACATGGTCGAATACATTGAGAAGTTTAGCGAGGACGTTGTGGAAGACGTATTAGTAATAGGAAAAAGTGGGGATTATGATCTCATAATCGTTGGAAAAGGTCGATTCCCATCGAATATGGTGGCTAAATTGGCAGAAAGGAAACCAGAACATGCCGAGTTAGGTCCTATTGGAGATGTTTTATCTTCATCAGAACATGCGGTGTTGTCATCTATATTGGTTATTCAACAACATGATGCGACATTGGTAGATGATGCTCCAGTTTGCAAGGTGCATGATGAGCATGGCATGGTCAACAATCACGAATCATCTCGTAGAGTAGGAATTTCAATTGGAAATGACAGTGCAGTGTAA 2538 0.4886 MPFNITSIKTSSNGVWQGDNPLDYAFPLLTLQIILVLIVTRSLALLLKPLRQPKVIAEILGGVLLGPSALGRNKSYLHRMFPSWSTPTLESVASIGLLFFLFLVGLELDLNSIRRSGKRAFSIAAVGITLPFVCGIGVAVVLRKTVDGADEPGFAQFIVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVVAWILLALAVALAGNGSGSHKSPLVSVWVLLSGLAFVVFMMVAVRPAMAVVARKGENDATDEFYVCLTLAGVLVSGFMTDLIGIHSIFGAFVFGLTIPKEGNFAKKLTERIEDFVLGLLLPLYFASSGLKTDVTTIRGASAWGLLVLVIATACAGKILGTFAVAMFCMIPARESLTLGFLMNTKGLVELIVLNIGREKKVLNAEMFAILVLMALFTTFITTPIVMAIYKPARGNSMKAPRKLGDSSRGSRDEGVEKFRVLACLHGPANIPSIINLIESTRSTKKSFIKLFMMHLVELTERSSSIIMVHRARRNGFPFFNRSHRDQWHDRIAGAFQAYSQLGRVMVRSTTTLSSLSTMHEDICHVAEEKTVTMIILPFHKHWRTEVNGDNQKYQVVENAGHEWRVTNQKVLMNAPCSVVVLVDRGYGNLPQTPIPNSIVSQRVCIIFFGGPDDREALELGKKMVEHPTVKVSVVRFIEKDGLDENNIVLSFSPGQNNDESYSFSTVKVNRQKERELDEEAIKEFKSKLNDMVEYIEKFSEDVVEDVLVIGKSGDYDLIIVGKGRFPSNMVAKLAERKPEHAELGPIGDVLSSSEHAVLSSILVIQQHDATLVDDAPVCKVHDEHGMVNNHESSRRVGISIGNDSAV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01943 845 Gene3D - 28 435 IPR038770 -
Phco2g01943 845 Pfam Sodium/hydrogen exchanger family 35 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Phco2g01943 845 Gene3D - 488 782 - -
Phco2g01943 845 PANTHER CATION/H + ANTIPORTER 8 807 - -
Phco2g01943 845 FunFam Cation/H(+) antiporter 15 28 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01943 Phco-Chr2 50122714 50127696 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01943 2 50122714 50127696 Phco2g01943 2 50122714 50127696 ECH