Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01922 ATGACGGGATTTTCTCGCTCGCGCGATCGCGCTTCTTCCTCTTCGCACAATTCCAACAGCAGTGGTAGCAATGTATTCAATTTGCTCGCAAGGAGAGAGATCTCGCCCCGAACAAAATACGTGGCCAAATGGCACTGGAGAGAAGCTTCTAAGTCAAAGTCTAGTCCTTATTCTCGTCCCAAGAACGAGGTTGTGAGAGATGCAAGACGTGGTCTCCTCTCGTGGGTTGAGGCTGAGTCACTGCGGCATCTGTCAGCTAAGTATTGTCCTTTATTGCCTCCTCCTCGGTCTACTATTGCAGCAGCATTTAGTTCAGATGGGAAAGTTCTTGCCTCTACACATGGTGACCATACAGTGAAGATAATTGATTGTGAAACGGGAAGTTGCTTGAAGGTGTTAATTGGTCATAGGAGAACGCCTTGGGTGGTTAGGTTCCATCCATTGCATCCACATATACTTGCTAGTGGGAGCTTGGATCAAGAAGTTCGTCTGTGGGATGCTAACACATCAGAGTGCATAATATCTCATCATTTCTACCGGCCCATTGCATCTATTGCTTTTCATGCCAAAGGTGAAATAATTGCTGTTGCATCTGGCCACAAGTTGTACATATGGCACCACAACAATAAAGGTGAAGCATCCTCACCTATATTTGTGTTGAAGACAAAGCGCTCACTCCGGGCTGTGCATTTTCACCCACATGCCGCACCATATCTTTTAACTGCAGAGGTCAATGATCTTGACTCTTCAGATTCCTCAATGACAGAGGCAACATCTCTTGGCTATTTACAATATCCTCCGCCTGCTGTTTTTGTCACAAATATTCATCCTACAGAACATATTAGTCGTTCCAGCGAACTACCTTATGTTTCATTACCTTTCTTTTTTATGCCCTCATATACTCTTGACGAGTCAAGAGCAGAACTACAGCATTCTAGTCATGATGTGGGCTCAGGTAGCATGCAAATTGAGTCTTCTGCCATGGTACAGTTACAGGCAGACACAAGTGCAACAGAACAATATGGGGCTACAGTGTCTCCCATGGATACATTCTCTGAGATGCCCGCTAGTTCTCAATCTGGTACAGAATATCCCGCTCATGCTGCTTTCTCTAATGGAATGGGAATTGGCCTCAGTAATCTCAAAATGGATGGTATGGAGACTGATGAAACCAGTCCTGCTGAAGGAAGCCAACATGGAAACTCTACTAATACCTATTCTCTTAATGGTGTGCTACATGGACTGTCTAGGCAAACTGCCAACCATGGGGTTCCCTCTGAGTTGGGTCAATTTAACCAGTTTTTTCCTTCTAGTTCAAGAGATCCAATTGCATGGGAGTTGCCTTTTCTCCAAGGATGGTTAATGGGTCAAATCCAAGTTGGTGTTCCTTCAATGCTTCCTCACATGGGTGCTAGTCGTGACATTCTAGCCCAACAGATTGGTTCTTCCACAATGCCATCTAATTTTTCCAGTTCTAATAATGATGCAGCAATGTCATCTTCAGCAATAACTGGCAGCATCAGCATACCAGGTTCTTCACTGAGATCAGGTTTGCGGAATCATTTTTCACAATCCCGTCAACCTGTATCTGAATCAGGCAATCTTGCTTCTTCTATTAATAATCCACATGATGGATCCGATATCCAAACAATCATGAGTCGAATTCAATCAGAACTTGCTGCTACATCAGTGGCTGCTGCAGCAGCTGCAGACTTGCCTTGCACTGTGAAGTTAAGAGTGTGGTCACATGACATAAAAAATCCATGTGTCCCACTTAATGCCGACAGATGTCGCCTAACCATACCGCATGCTGTCCTCTGCAGCGAAATGGGTGCTCATTTTTCACCATGTGGTAGATTTTTAGCTGCCTGCGTTGCATGTATGCTTCCTCATATAGAGGCTGATCCAGGTTTACAAACTCCAGTACACCAAGAGCCTGGTGTTGCAACATCACCAACCAGACATCCAATCTCAGGACACCAAGTTATGTATGAGCTACGGATATACTCCCTTGAGGAGGCCACATTTGGGTTGGTGCTTGCGTCACGGGCAATTAGAGCAGCTCATTGTCTGACTTCAATTCAGTTCTCTCCTACATCTGAGCACATACTACTTGCCTATGGTCGACGCCATGGTTCTCTTCTTAAAAGTATTGTCATTGATGGAGAAACAACATTACCTATATATACAGTGCTAGAGGTATACAGGGTGTCAGATATGGAACTTGTTAGGGTGCTTCCTAGTGCAGAAGACGAGGTCAATGTGGCATGCTTTCATCCTTTTGCTGGGGGAGGACTAGTTTATGGAACAAAGGAAGGAAAGCTTAGGGTCCTCCAGTACGACGGTGCTCATGCAGTGAATGGCAACGGACCAAGTTACTTTCCTGAGGAGACCATAATTGGAGTCAGTCAGTGA 2415 0.4501 MTGFSRSRDRASSSSHNSNSSGSNVFNLLARREISPRTKYVAKWHWREASKSKSSPYSRPKNEVVRDARRGLLSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSSDGKVLASTHGDHTVKIIDCETGSCLKVLIGHRRTPWVVRFHPLHPHILASGSLDQEVRLWDANTSECIISHHFYRPIASIAFHAKGEIIAVASGHKLYIWHHNNKGEASSPIFVLKTKRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSLGYLQYPPPAVFVTNIHPTEHISRSSELPYVSLPFFFMPSYTLDESRAELQHSSHDVGSGSMQIESSAMVQLQADTSATEQYGATVSPMDTFSEMPASSQSGTEYPAHAAFSNGMGIGLSNLKMDGMETDETSPAEGSQHGNSTNTYSLNGVLHGLSRQTANHGVPSELGQFNQFFPSSSRDPIAWELPFLQGWLMGQIQVGVPSMLPHMGASRDILAQQIGSSTMPSNFSSSNNDAAMSSSAITGSISIPGSSLRSGLRNHFSQSRQPVSESGNLASSINNPHDGSDIQTIMSRIQSELAATSVAAAAAADLPCTVKLRVWSHDIKNPCVPLNADRCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPHIEADPGLQTPVHQEPGVATSPTRHPISGHQVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFAGGGLVYGTKEGKLRVLQYDGAHAVNGNGPSYFPEETIIGVSQ 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01922 804 ProSiteProfiles Trp-Asp (WD) repeats profile. 133 175 IPR001680 GO:0005515
Phco2g01922 804 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 20 799 - -
Phco2g01922 804 SUPERFAMILY WD40 repeat-like 100 242 IPR036322 GO:0005515
Phco2g01922 804 Pfam WD domain, G-beta repeat 127 166 IPR001680 GO:0005515
Phco2g01922 804 SMART WD40_4 85 123 IPR001680 GO:0005515
Phco2g01922 804 SMART WD40_4 169 206 IPR001680 GO:0005515
Phco2g01922 804 SMART WD40_4 739 779 IPR001680 GO:0005515
Phco2g01922 804 SMART WD40_4 126 166 IPR001680 GO:0005515
Phco2g01922 804 FunFam Activating molecule in BECN1-regulated autophagy protein 80 260 - -
Phco2g01922 804 SUPERFAMILY Tricorn protease domain 2 610 785 - -
Phco2g01922 804 Gene3D - 81 255 IPR015943 GO:0005515
Phco2g01922 804 MobiDBLite consensus disorder prediction 1 23 - -
Phco2g01922 804 ProSitePatterns Trp-Asp (WD) repeats signature. 153 167 IPR019775 -
Phco2g01922 804 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 133 171 - -
Phco2g01922 804 MobiDBLite consensus disorder prediction 518 547 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01922 2 49819879 49826269 Phco2g01922 2 49819879 49826269 ECH