Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01921 ATGGCTGCAGATTCCAACTCAAACCTCAGAATCACCATTGAAAGAAACCCTCCCCAGCCACGCCTAGCTGAGTTGAACATCAAGTGCTGGCCCAAGTGGGGTTGTTCTCCAGGGAAGTACCAGTTGAAATTTGATGCAGAAGAGACATGCTACTTGGTGAAAGGGAAGGTGAAGGCATACCTAAAAGGGTCATCAGAGTTTGTGGAGTTTGGAGCTGGGGACCTTGTGACAATTCCAAAAGGACTGAGTTGCACTTGGGATGTGTCTGTTGCAGTGGATAAGTACTACAAATTTGAATCAAATTCTTCTTCTACATCATCATCATCATCCTCTTGTTAA 339 0.4484 MAADSNSNLRITIERNPPQPRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLVKGKVKAYLKGSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESNSSSTSSSSSSC 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01921 112 SUPERFAMILY RmlC-like cupins 25 96 IPR011051 -
Phco2g01921 112 PANTHER OS04G0445200 PROTEIN 6 99 - -
Phco2g01921 112 CDD cupin_TM1112-like 30 98 - -
Phco2g01921 112 Gene3D Jelly Rolls 2 98 IPR014710 -
Phco2g01921 112 Pfam EutQ-like cupin domain 23 96 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01921 Phco-Chr2 49815524 49816141 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01921 2 49815524 49816141 Phco2g01921 2 49815524 49816141 ECH
Phco2g01921 2 49815524 49816141 Phco6g00740 6 7330530 7331008 PCT