Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01918 ATGGACTCAAAAGGAGAGGCTGAACCTCAGGAGGAGAGGCCTTCATCACCAATGCGGGTCCTGCAGCATTTTTCGGGGGGCGCATTCAGAGTTGCTGGGGAAGCATTTCACAATATGTATTCTGGTGGTGGGTCAAGCATGCCACAAACGGGGCCTGGTGGGCATAGACGTTGTCAAAGTGAGCTTGTTAGTAGAGGAGTTCAGCGTACTAATAGCTTACAGAAATTAAGATCTCACGTGCACAGGGCATGGCGCTGGGGTGGCAAATCCCGTGAAGAAGATTCCCTGGCCAATTTCAACCCTGAGGTCATGGCAAACCAGAAACGGCAGTGGTATCGGCTTCATCCTAAAAGTCTGGACTGTGTACATAATAAGGAGCCGACATCGCTCTTTGAACATTTTATTATTGTGGGGCTGCATCCAGATTCTAATTTGGAAGCCGTGGAGCACTCATTTGCAAGAAGGAAGAAGTGGGAAAAGGAGAAGGGGAAACCTGAATTTCGAGATTGCAGAAAGCCTGAGCAACCAAAACTACCAGAACCAACTTTGGAACCTCAGTTACTGTTCAAATATCCTCCTGCAAAGAAGCTAGCAATGCGTATGAAGGATTTAGCTCCCTTTTGCTTTCCTGAAGGTGTTAAGGCAAGGTTGTTGGAGAGGACTCCATCTCTTAGTGAACTAAATGAACTTGTCTATGGACAGGAACATTTAGGAAAAGATGATCTTTCATTTGTCTTTACAGTAAAGGCATCAGACAATACAACACTTTATGGAGTTTGCTTACATGTGCCTGAAATTGTTCAAAGCCCCCCTGGTATCTTTGGCATATCATCTCCTTTTTCTCATTCCTCATTCAGCCGTTTTCTGGTTTCTGCACCCCGCTGCTATTGTCTTCTGACTAGAGTTCCCTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTCATTGCACAGGAGCGCCTGAATCGGATAACACAGTTTATAAATGAGATGACTCTTACTGGAAGCGTTCCATCATCGCCCAAACAAGATGATCAAATAAGGTCAAAGGCTGCAAACTTCCCAGAGAGGGAGTCATCTAATGAATGGATGGATTCTGCAATTCCTCTCGATGGTGCAGCTGTTATTACTGCTGCAGCTGCTGGGATTATATCAGATGATGAAAGCCAACAGTTATCACCTAAATTACGGGATTGTCGCTGTCAATCTCCTGTAAGTGGGACTGGCAGTGATGCTTCAGATTTTGTTCATGTCAGGGATATCGATAAGGAGGACAAGAAGAATCTCCAAGTTCTTTATAATTCTGAATTTAAGGCACCAGAAACTCTTGCTTCTATACAAAGAATGCATAGAGATTGCGAAAATGACCAAGTTTCTCCGAAAGCTGGAACACCTTTGTCTGCTCGAAATCGTGTCTTGGAGCGTCTTGGAAGTTTTGAATCACTTTTCAGTCCAGTTAGAAGCATGGCATCAGAAGATGAGGACGATTTTTTCTCAAACACCGAAAGAGATTATGGGGATGAATTGTTAATGGAATGGGCAATGGAGAATAAGAATGATTTACTACAAATAGTGTGTAGATACCATGCTCAACCTATTCCACCTCGAGGAAGTGATTTTGTCTTCCACCCTCTCGAACATCTACAAGCTATTCAGTACATACGACACTCAGTTGCTGCTCTTGGCTTCGGAGATGATTGTCCAAACTGTTCTGAACCAGCTCAGGACAATATGAAGCTGGCAGCGGCTGAGGAAGCCCTATCATTATCAGTATGGACAATGGCGACTACATGTCGAGTTCTGTCCCTTGATAGCGTGATGGCATTGATTACAGGAGTGTTGTTGGAAAAACAGGTGGTAATAGTGTGCCCAAATCTGGGTGTTCTATCTGCCACAGTGCTTTCTCTTATTCCCATGATTCGTCCTTTTCAGTGGCAGAGTTTATTGCTCCCAGTTTTACCTGGGAAAATGATTGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCAGTTGACTTGAATATGAGAACTACTAATCTTGTTCTTGTTAATATACTGAAGGACCAGGTTGCAATGTGTCCATTACCAAAACTTCCACAGCATAAAGAGCTTCTCTCGCGGTTGAGTCCAATTCATGCTAGACTTTCAAATGAACGATCAATTGCTAGAAAGCATCCTGTACATAGGTGCAACGAAGTCCAGGCCGAAGCTTCAACTCAGTTTTTAAATATAATGTGGCACTATTTGGAGTCTCTTTGTTCGGATCTGAAATCCCACACGATAACTAGTGTACAATCAAATAACGATAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCCTTTCCTGCTAGGGATCAACCATTCATTAAGCTTTTTGTTGATACACAGCTCTTCACTGTTTTATCAGACACTCGTTTGTCAAGCTTTGAGAGTGGCGAGTCATAG 2466 0.4303 MDSKGEAEPQEERPSSPMRVLQHFSGGAFRVAGEAFHNMYSGGGSSMPQTGPGGHRRCQSELVSRGVQRTNSLQKLRSHVHRAWRWGGKSREEDSLANFNPEVMANQKRQWYRLHPKSLDCVHNKEPTSLFEHFIIVGLHPDSNLEAVEHSFARRKKWEKEKGKPEFRDCRKPEQPKLPEPTLEPQLLFKYPPAKKLAMRMKDLAPFCFPEGVKARLLERTPSLSELNELVYGQEHLGKDDLSFVFTVKASDNTTLYGVCLHVPEIVQSPPGIFGISSPFSHSSFSRFLVSAPRCYCLLTRVPFFELHFEMLNSLIAQERLNRITQFINEMTLTGSVPSSPKQDDQIRSKAANFPERESSNEWMDSAIPLDGAAVITAAAAGIISDDESQQLSPKLRDCRCQSPVSGTGSDASDFVHVRDIDKEDKKNLQVLYNSEFKAPETLASIQRMHRDCENDQVSPKAGTPLSARNRVLERLGSFESLFSPVRSMASEDEDDFFSNTERDYGDELLMEWAMENKNDLLQIVCRYHAQPIPPRGSDFVFHPLEHLQAIQYIRHSVAALGFGDDCPNCSEPAQDNMKLAAAEEALSLSVWTMATTCRVLSLDSVMALITGVLLEKQVVIVCPNLGVLSATVLSLIPMIRPFQWQSLLLPVLPGKMIDFLDAPVPYIVGIQHKPVDLNMRTTNLVLVNILKDQVAMCPLPKLPQHKELLSRLSPIHARLSNERSIARKHPVHRCNEVQAEASTQFLNIMWHYLESLCSDLKSHTITSVQSNNDRVSLLLKDSFIDSFPARDQPFIKLFVDTQLFTVLSDTRLSSFESGES 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01918 821 Gene3D - 590 756 IPR043153 -
Phco2g01918 821 ProSiteProfiles Tripartite DENN domain profile. 169 819 IPR037516 -
Phco2g01918 821 SMART uDENN_cls 127 264 IPR005113 -
Phco2g01918 821 Pfam DENN (AEX-3) domain 590 691 IPR001194 -
Phco2g01918 821 Gene3D - 119 340 - -
Phco2g01918 821 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 64 816 - -
Phco2g01918 821 Pfam uDENN domain 185 263 IPR005113 -
Phco2g01918 821 SMART DENN_cls 291 693 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01918 Phco-Chr2 49786555 49795117 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01918 2 49786555 49795117 Phco2g01918 2 49786555 49795117 ECH