Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01893 ATGAAAAGACGACAAAATTATCATTTTCATGTATTCTATTCTACGGAGGTGCAAGAAGAAAGCACGGAGGAAAGGCGCAATCTTTTCTCGGCGTCGAAGCTGTTTCTCTTCTTTGAGGTAAAGACATTTTTTTCAAGTATGGCAGATAGTGAATCCGTTGTTACTGAAGCATCTGCTCATTCCGCTGCTGAGACATATGCTTCGGCTGGTTATGCCGAGTCTGGGTCAAATCCTGCTCTTGAGGCAGGTACTACTGTTGATCAACCTGCAGGAGAAGGTACTCAGTCCACTTCAACCTATGAATATGGTTATTCTAATACTGGTGATGTGAATGCGTATACTGGGGATCCGAATTCTGTTCTACAACAAGCCCAATTCAATGCAACTGGAGATACTAAGCCTGCTGGTGGACTGCCTGATGCTAACGAGGCATCTGCTGGGGTTGGAACCACTGCTGCTGAACCTGCTCTGGTTTCTGGCTACAGTTCATCTGTCAATGGTGGTGTAGTCGGTGGAGTGGCAAATTCTTCTGGACTTGAAAACGGAAATGCGTTGGAAAACGTTGACGGGTCAGCTGATGAAAAACAACTCGCAGATGGCTACGCTGCCTTGTCTGCTGAGGAAGATCGACTATGGAATATTGTACGAGCTAATTCTTTAGATTTCAGTGCTTGGACTTCCTTGATTGAAGAGACAGAGAAGGTAGCCGAGGAAAATATTCTGAAGATTCGAAGAGTTTATGATTCCTTTCTAGCAGAATTTCCATTGTGCTATGGTTATTGGAAGAAATATGCCGACCATGAGGCACGACTTGGCTCTATAGATAAAGTTGTTGAAGTGTATGAACGTGCTGTTCAAGGGGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACGTATGGGGATCCAGACACTGTTCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCGTTTCCCCTCTGGGATAAATACATTGAATATGAGTACATGCAGCAAGACTGGGCACGCCTTGCCATAATTTACACCAGAATATTAGAGAATCCAAATCAACAATTAGATCGGTATTTCAGCAGCTTCAAAGAGTTAGCTGGAAACCGACCTTTGTCAGAGTTACGAACTGCTGAAGAAGCTGCTGTAAGTGTTGCTTCTGAGGCTGCTGGACAAGGTACTGAGGGAGAGGTTCATCCTGATGGTGCAGAGAATTCTCCTAAATCTGTAAGTGCTGGCTTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATCTATAAAAAGGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCCGGAGGCCCTATTTTCATGTACGGCCTCTCAATGTTGGAGAGCTTGAAAATTGGCACAACTATCTGGATTTTTTAGAAAGGGAAGGGGACTTAAGCAAGGTGTCTTGTTATCTTCCTAATGATCTGTCACAGGCAAGGAGGGTCCCTCCTTTCATATTTGAGGGGCCTCTCTGTCCCGCTAAGGAGTATTTCTTGATGCTTTGTATTTTCCTTTTGTTTTATATTATTGTCAAGTTGTATGAGAGGTGTGTCATTGCATGTGCCAATTATCCTGAGTATTGGATACGGTATGTTTTGTGCATGGAAGCCAGTAGAAGCATGGATCTTGCAAATAATGTTCTTGCCCGAGCCACCCAAGTCTTTGTTAAGAGACAACCTGAGATACATATTTTCTGTGCCCGGTTTAAGGAGCAGAATGGAGATATAGATGGTGCCAGAGCTGCGTATCAACTTGTGCATACTGAAACTTCCCCTGGTCTTCTTGAAGCAATAATCAGGCATGCCAATATGGAACACCGATTGGGAAAAATGGAGGATGCCTTCTCCTTGTATGAACAGGCTATTGCTATTGAGAAAGGAAAAGAACATTCACAAACTTTGCCGATGTTGTTTGCTCAGTATTCTCGATTTGTATATTTGGCTTCTGGGAATGCAGAGAAGGCAAGACAAATTTTAGTTGAGGGGCTGGAGAATGTTTTGTTGTCAAAACCACTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAACCCTTGCCAAAGCGAGTTGATATTGACTTTCTGGAGTCATGGGTTTGCAAATTCATAATGCCTAACTCAGAGAGTCCTGGTGTAGCAAGTGCAATTGAGCGTGAGGAACTTTCTAGTATTTTTCTGGAGTTTTTAAATCTCTTTGGAGATGTCCAATCAATCAAGAGGGCCGAGGATAGGCATGCCAAATTGTTTTTGCCACACAGAAGCATGACAGAGTTGAAAAAACGTCATGCTGAGGATTTCTTATCTTCAGACAAAGTAAAAGTGTCAAGAACGTATTCTGTTCAATCACCTGCTCAATCTGTGATTGGTGCGTATCCAAATGCACAGAACCAATGGACTAATTATGGAGTACAACCTCAAACTTGGCCTCCGGTTACACAAGCACAAGGGCAACAATGGACTGCTGGCTACACCCAGCAGGCTTCCTATGGGGCTTATGCTGGATATGGCGGCAATTATGCAAATTCTCAATTGCCTACTTCAGTTCCACCAAGTACTGCATACGGAGCTTATCCTCCTTCATATCCTGCACAGCCGGCAGTTCCTCAACAGAACTATGCGCAACCTGTTGCAGCCCCTGCACAGCAACCTGCTGCAGTTCCTCAAGCCTATTACGGGAGTTATTACTGA 2751 0.4333 MKRRQNYHFHVFYSTEVQEESTEERRNLFSASKLFLFFEVKTFFSSMADSESVVTEASAHSAAETYASAGYAESGSNPALEAGTTVDQPAGEGTQSTSTYEYGYSNTGDVNAYTGDPNSVLQQAQFNATGDTKPAGGLPDANEASAGVGTTAAEPALVSGYSSSVNGGVVGGVANSSGLENGNALENVDGSADEKQLADGYAALSAEEDRLWNIVRANSLDFSAWTSLIEETEKVAEENILKIRRVYDSFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAIIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTAEEAAVSVASEAAGQGTEGEVHPDGAENSPKSVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFLEREGDLSKVSCYLPNDLSQARRVPPFIFEGPLCPAKEYFLMLCIFLLFYIIVKLYERCVIACANYPEYWIRYVLCMEASRSMDLANNVLARATQVFVKRQPEIHIFCARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIRHANMEHRLGKMEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVLLSKPLLEALLHFEAIQPLPKRVDIDFLESWVCKFIMPNSESPGVASAIEREELSSIFLEFLNLFGDVQSIKRAEDRHAKLFLPHRSMTELKKRHAEDFLSSDKVKVSRTYSVQSPAQSVIGAYPNAQNQWTNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGGNYANSQLPTSVPPSTAYGAYPPSYPAQPAVPQQNYAQPVAAPAQQPAAVPQAYYGSYY 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01893 916 Gene3D Tetratricopeptide repeat domain 213 380 IPR011990 GO:0005515
Phco2g01893 916 FunFam Putative pre-mrna-processing factor 39 213 383 - -
Phco2g01893 916 SMART hat_new_1 344 377 IPR003107 GO:0006396
Phco2g01893 916 SMART hat_new_1 272 304 IPR003107 GO:0006396
Phco2g01893 916 SMART hat_new_1 307 342 IPR003107 GO:0006396
Phco2g01893 916 SMART hat_new_1 631 666 IPR003107 GO:0006396
Phco2g01893 916 SMART hat_new_1 672 704 IPR003107 GO:0006396
Phco2g01893 916 SMART hat_new_1 238 270 IPR003107 GO:0006396
Phco2g01893 916 SMART hat_new_1 527 559 IPR003107 GO:0006396
Phco2g01893 916 Gene3D Tetratricopeptide repeat domain 464 805 IPR011990 GO:0005515
Phco2g01893 916 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 192 905 - -
Phco2g01893 916 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 528 798 - -
Phco2g01893 916 MobiDBLite consensus disorder prediction 78 103 - -
Phco2g01893 916 SUPERFAMILY TPR-like 215 773 IPR011990 GO:0005515
Phco2g01893 916 MobiDBLite consensus disorder prediction 394 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01893 Phco-Chr2 49541238 49551615 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01893 2 49541238 49551615 Phco2g01893 2 49541238 49551615 ECH