Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01890 ATGTCGAAGCGAGGTCGCGGAGGATCGGCGGGGAACAAGTTTAGGATGTCACTGGGTCTGCCGGTGGCGGCGACGGTGAACTGCGCCGACAACACTGGCGCCAAGAACCTCTACATCATTTCAGTGAAGGGGATCAAGGGGAGGCTGAACCGGTTGCCTTCGGCTTGTGTTGGAGACATGGTTATGGCCACCGTCAAGAAGGGAAAGCCCGATCTCCGTAAGAAGGTGTTGCCGGCCGTCATCGTCCGTCAGCGCAAGCCATGGCGCCGAAAGGACGGCGTTTTCATGTACTTCGAAGATAATGCCGGTGTTATCGTGAATCCAAAGGGTGAAATGAAAGGTTCTGCTATTACCGGACCAATTGGAAAGGAGTGTGCTGATCTCTGGCCCAGGATTGCAAGTGCTGCCAATGCTATTGTTTAA 423 0.5437 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01890 140 ProSitePatterns Ribosomal protein L14 signature. 79 105 IPR019972 -
Phco2g01890 140 Hamap 50S ribosomal protein L14 [rplN]. 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Phco2g01890 140 SUPERFAMILY Ribosomal protein L14 11 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Phco2g01890 140 Gene3D Ribosomal protein L14 1 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Phco2g01890 140 FunFam 60S ribosomal protein L23 1 140 - -
Phco2g01890 140 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 20 139 IPR000218 GO:0003735|GO:0005840|GO:0006412
Phco2g01890 140 SMART Ribosomal_L14_2 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Phco2g01890 140 Pfam Ribosomal protein L14p/L23e 22 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01890 Phco-Chr2 49518483 49519255 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01890 2 49518483 49519255 Phco2g01890 2 49518483 49519255 ECH
Phco2g01890 2 49518483 49519255 Phco6g01087 6 10971474 10972519 PCT