Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01862 ATGGCAAGAGGAAGAGCAGATGTGAACTCTAGAAAAAAATTGGTCATAACTGTGTTGGTTTTGGTGATTGTTGGTGCTTTCTTCTACTTTTATTCTCAGAGTAGTGATTCATCTATTGTTGAGTATGGTGATAAATCTTTGAGACAATTTGGTTTGAAAGGGGACAAAGATGTGGGTGAATCTTTCTCCACACTTGTTGGAAGAGAGGACAGTGCTATACCAAAGAGCATTCCAGTCTGTGATGATCGTCTATCAGAGCTTATTCCTTGTCTGGACAGAAACCTCATATACCAAACAAGATTGAAGCTTGATTTATCTGTGATGGAGCACTATGAAAGACACTGCCCAATACCAGAGAGGCGATATAATTGTTTAATTCCTCCTCCTCCAGGGTACAAGATTCCAATCAACTGGCCCAAAAGCAGAGACCAGGTGTGGAAGGCAAATATACCTCATACCCATCTTGCAACAGAAAAATCTGACCAGAACTGGATGGTTGTGAAAGGTGAAAAAATAGTTTTTCCTGGTGGAGGAACCCACTTCCATTATGGTGCTGATAAATACATTGCTTCAATTGCTAATATGCTTAATTTTCCAAACAATAATATAAACAATGAGGGAAGAGTCAGGTCTGTTCTTGATGTTGGCTGTGGAGTTGCCAGCTTTGGAGGATATCTTCTTTCTTCTGATGTGATAACAATGTCATTGGCTCCAAATGATGTTCATCAAAATCAAATTCAGTTTGCCTTAGAGAGGGGAATTCCAGCATATCTTGGTGTCTTAGGGACCCTAAGGCTCCCTTACCCGAGTAGATCTTTTGAATTTGCTCATTGTTCTCGCTGTAGAATTGATTGGCTTCAGAGAGATGGTATACTTCTCCTTGAGCTGGATAGGTTACTCAGGCCAGGAGGTTATTTTGCATATTCATCTCCTGAAGCCTATGCAGAGGATGAGGAGGATAGGAGAATATGGAGAGAAATGAGTGCTCTTGTGGAGAGAATGTGCTGGAAAATTGCTGCTAAGAGGAATCAGACTGTCATTTGGGTCAAGCCTCTCACAAATAGTTGCTACTTAAAGAGATTGCCTGGTACTCTACCTCCACTCTGCAGATCTAATGATGATCCTGATGCTGTTTCCGGAGTTAAAATGAAAGCTTGCATTTCACGCTATTCTGATCAAATGCACAAAGCAAAAGGAAGTGGTTTGGCTCCTTGGCCAGCTCGATTGACTACTCCACCTCCTCGTCTGGCAGAAATTCACTATTCTACAAAAATGTTTGAGAAGGACGTGGAAGTTTGGCAACAAAGAGTTGATAATTACTGGAGCAAGCTAGGCAATAAGATTAAAGCAGGCACAATTCGGAATGTGATGGATATGAGGGCAAGTATTGGTTCATTTGCGGCAGCGTTGAAGGAGAAAGATGTTTGGGTTATGAATGTGGTGCCAGAAAATGAACCAAAATCTCTCGCCATAATATATGACCGAGGATTGATAGGAGCAGTTCACAACTGGTGTGAAGCTTTTTCAACCTACCCTCGAACGTATGATCTACTCCATGCATGGACTGTATTTTCTGATATTATGAAGAAAGAATGTAGTCCAGAGGATTTGTTGATTGAGATGGATAGAATCCTTAGGCCAAAGGGTTTCATCATTGTCTATGATAAGCGGTCAGTGGTGGAGTATGCGAGGAAATACTTGCGAGCATTACACTGGGAAGTTGTCATCATGTATGACATAGATCAAGGTAAAGATAGTGATGATGATGATTATCATGCAGTGGTTATAATTCAAAAGAAGATGTGGCTCACAAGTGATAGCATCCAGGTTTCAGAATAG 1839 0.4105 MARGRADVNSRKKLVITVLVLVIVGAFFYFYSQSSDSSIVEYGDKSLRQFGLKGDKDVGESFSTLVGREDSAIPKSIPVCDDRLSELIPCLDRNLIYQTRLKLDLSVMEHYERHCPIPERRYNCLIPPPPGYKIPINWPKSRDQVWKANIPHTHLATEKSDQNWMVVKGEKIVFPGGGTHFHYGADKYIASIANMLNFPNNNINNEGRVRSVLDVGCGVASFGGYLLSSDVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTLRLPYPSRSFEFAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAEDEEDRRIWREMSALVERMCWKIAAKRNQTVIWVKPLTNSCYLKRLPGTLPPLCRSNDDPDAVSGVKMKACISRYSDQMHKAKGSGLAPWPARLTTPPPRLAEIHYSTKMFEKDVEVWQQRVDNYWSKLGNKIKAGTIRNVMDMRASIGSFAAALKEKDVWVMNVVPENEPKSLAIIYDRGLIGAVHNWCEAFSTYPRTYDLLHAWTVFSDIMKKECSPEDLLIEMDRILRPKGFIIVYDKRSVVEYARKYLRALHWEVVIMYDIDQGKDSDDDDYHAVVIIQKKMWLTSDSIQVSE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01862 612 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 20 602 IPR004159 GO:0008168
Phco2g01862 612 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 86 583 IPR004159 GO:0008168
Phco2g01862 612 FunFam Probable methyltransferase PMT19 419 582 - -
Phco2g01862 612 FunFam probable methyltransferase PMT3 184 351 - -
Phco2g01862 612 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 348 IPR029063 -
Phco2g01862 612 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 420 573 IPR029063 -
Phco2g01862 612 Gene3D Vaccinia Virus protein VP39 180 348 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01862 Phco-Chr2 49286899 49290905 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01862 2 49286899 49290905 Phco2g01862 2 49286899 49290905 ECH
Phco2g01862 2 49286899 49290905 Phco6g00041 6 447284 451798 PCT
Phco6g01063 6 10737281 10740423 Phco2g01862 2 49286899 49290905 PCT