Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01859 ATGGGTTCTCTTCCTGCGCACTTATTCCCAGCGACGGTGGCCAAACATTGCCTTGACGAGAGCAGCCACATTGACGAGGGCGCCCTGACGAAGCTGTTCAAGTCGCAGCAGAGCCACCTCAACTTCTTCTTCGATCACATCGACTACTCTCAAACCCTGGCCTTCACGCGCGCCCTCCTTAACGCGTCCGGCACCGTCTTCTTCACCGGCGTCGGCAAGTCCGGCTTCGTTGCGCACAAGATCTCGCAGACGCTTGTCTCGCTTGGCATCCGCTCCGCCTTCCTGTCGCCGGTGGACGCGCTCCACGGCGACATCGGGATCCTCACTGACCGCGACGTGCTCGTCCTCCTCAGCAAGTCAGGCGCCACGGAGGAGCTCCTCCGCCTAGTGCCGTGCGCGAGGGCGAAGGGTGCACTCCTCATTGCCCTCACTTCCGTTGAAGGAAACGCGCTGGCCGCGGTGTGTGACATGACCGTGCATTTACCTCTCCAGAGAGAGCTCTGTCCGTTCAACCTTGCGCCGGTCACATCCACCGCCATTCAGATGGTTTTTGGGGACACCGTGGCCATCGCGCTCATGGAGGCGAGGAATCTCACCAAGGAGGAGTACGCCGCGAACCATCCCGCCGGCAAGATCGGGAAGAGTCTCATCTTCAAGGTGAAGGATGTGATGAAGAAACAGGAAGACGTTCCGATATGCAGAGAATCAGATTTGATTATGGATCAGCTTGTGGAATTGACGAGTAAAGGATGCGGATGCCTCCTTGTTATCGACGACTGTTACCGTCTGATCGGAACGTTCACCGACGGTGATCTCCGTCGCACTCTCCGAGCCAGTGGAGAAGCCATTTTCAAACTCACTGTGGGGAAGATGTGCAATAGGAATCCAAGAATTATTGGTCCGGAGGCTATGGCGGTGGAGGCGATGAAGAAGATGGAGGCACCTCCATCGCCTGTTCAGTTTTTGCCTGTGATAAACGATGAGAATATTTTGATTGGGATTGTGACCTTGCATGGATTGGTTTCAGCTGGCTTATGA 1038 0.5607 MGSLPAHLFPATVAKHCLDESSHIDEGALTKLFKSQQSHLNFFFDHIDYSQTLAFTRALLNASGTVFFTGVGKSGFVAHKISQTLVSLGIRSAFLSPVDALHGDIGILTDRDVLVLLSKSGATEELLRLVPCARAKGALLIALTSVEGNALAAVCDMTVHLPLQRELCPFNLAPVTSTAIQMVFGDTVAIALMEARNLTKEEYAANHPAGKIGKSLIFKVKDVMKKQEDVPICRESDLIMDQLVELTSKGCGCLLVIDDCYRLIGTFTDGDLRRTLRASGEAIFKLTVGKMCNRNPRIIGPEAMAVEAMKKMEAPPSPVQFLPVINDENILIGIVTLHGLVSAGL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01859 345 PIRSF KdsD_KpsF 14 345 IPR004800 GO:0005975|GO:0016853
Phco2g01859 345 SUPERFAMILY SIS domain 31 344 IPR046348 GO:0097367|GO:1901135
Phco2g01859 345 Pfam CBS domain 220 276 IPR000644 -
Phco2g01859 345 Pfam CBS domain 288 343 IPR000644 -
Phco2g01859 345 Coils Coil 345 345 - -
Phco2g01859 345 ProSiteProfiles CBS domain profile. 224 283 IPR000644 -
Phco2g01859 345 Gene3D - 26 214 - -
Phco2g01859 345 PANTHER - 17 345 - -
Phco2g01859 345 CDD CBS_pair_SIS_assoc 216 341 - -
Phco2g01859 345 NCBIfam KpsF/GutQ family sugar-phosphate isomerase 64 335 IPR004800 GO:0005975|GO:0016853
Phco2g01859 345 ProSiteProfiles CBS domain profile. 292 345 IPR000644 -
Phco2g01859 345 Gene3D - 215 343 IPR046342 -
Phco2g01859 345 ProSiteProfiles SIS domain profile. 55 198 IPR001347 GO:0097367|GO:1901135
Phco2g01859 345 Pfam SIS domain 60 190 IPR001347 GO:0097367|GO:1901135
Phco2g01859 345 CDD SIS_Kpsf 64 191 IPR035474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01859 Phco-Chr2 49221410 49222823 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01859 2 49221410 49222823 Phco2g01859 2 49221410 49222823 ECH