Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01857 ATGGAGCGGTTGAAGCTGGCGCAACTGGGGGAGAGGCTCAAGACGGGTGGGGCCCAGATGGGGCGAATGGTCAGCGGCAAGGTCAAGGAGATGCTGCAGGCTCCCACGCCGGAGTCCAAGATGGTCGACGAGGCCACGCTGGAAACCATGGAGGCTCCTAATTGGGGCATCAATCTCAGGATATGTGCCATGATCAACGCCGACCAATTTAACGGCTCCGAGGTCGTTAAGGCCATCAAAAGGAAGATCAACCACAAGAGCCCTGTGGTTCAGACTCTTAGCCTCGACCTCTTGGAAGCCTGCGCCATGAACTGCGACAAGGTCTTCTCCGAAATTGCTTCCGAGAAGCTTCTTGATGACCTCGTTCGCTTCATTGATAACCCGCAGGCCCACCACGACACTCGACGTCGGGCTTTCCAGTTGATTCGGGCCTGGGGCAACTCCGAGGATCTTGCTTATCTTCCCGTCTTTCGTCAAACTTATATGAGTTTGAAAGGAAGGGATGGTCCACTTGACATGGCGGGAGGAAATTCACCACCTATTCCGTATGCCTCAGAGTCACATGCAAATCAATATCCTGTAGATCCCCCTGAAAGATACCCAATTCCTGAAGCTGAATTAGATATGGATGATCCAGCGGCTTTCTCTTCGAATTACCAACACATATCAGTTGAGGAGAAGAAAGAGCATCTTGTGGTTGCTCGGAATAGTCTCGAATTACTCTCTAGCATATTGAATTCTGAGGCTGAGCCAATACCTTTGAAGGAAGATTTAACTGTGAGCTTGTTGGGCAAGTGCAAGCAATCACTCTCTATCATCAAGGGGATTGTGGAAAGCACTACAAATGATGAAGCAACGCTTTTTGAGGCTTTATATCTCAATGATGAGCTTCAGCAGGTAGTTTCTAACTACGAGGAGTTAGAAGCTGCTCAAATGTCCGGGACACAACAACCTCAAAATGCTGAACATGCCAAGCATGATGCGGAAGCTGTTCAAAATCCCAGTGAAGTACCTGCAAGGTTTGAAATTGATGAATCAGAAGAATCTGAAGCTGATCAGAATCTGGATCGAAAGGTGCCCCAAAAATCTAACACTCTTGAAGTCAATGCAACTGAGGTCGAGGAGAATGGTGCTGCTGAAACTAAAATAGTTAATGACACAAAGGACAAGAATGTTGAATCTAGCTTCAAGCGAGATGCCGAATGA 1206 0.4801 MERLKLAQLGERLKTGGAQMGRMVSGKVKEMLQAPTPESKMVDEATLETMEAPNWGINLRICAMINADQFNGSEVVKAIKRKINHKSPVVQTLSLDLLEACAMNCDKVFSEIASEKLLDDLVRFIDNPQAHHDTRRRAFQLIRAWGNSEDLAYLPVFRQTYMSLKGRDGPLDMAGGNSPPIPYASESHANQYPVDPPERYPIPEAELDMDDPAAFSSNYQHISVEEKKEHLVVARNSLELLSSILNSEAEPIPLKEDLTVSLLGKCKQSLSIIKGIVESTTNDEATLFEALYLNDELQQVVSNYEELEAAQMSGTQQPQNAEHAKHDAEAVQNPSEVPARFEIDESEESEADQNLDRKVPQKSNTLEVNATEVEENGAAETKIVNDTKDKNVESSFKRDAE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01857 401 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Phco2g01857 401 SUPERFAMILY ENTH/VHS domain 34 167 IPR008942 -
Phco2g01857 401 SUPERFAMILY GAT-like domain 186 308 - -
Phco2g01857 401 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Phco2g01857 401 Gene3D - 28 183 IPR008942 -
Phco2g01857 401 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Phco2g01857 401 MobiDBLite consensus disorder prediction 310 401 - -
Phco2g01857 401 Pfam GAT domain 235 308 IPR004152 GO:0035091|GO:0043130
Phco2g01857 401 Pfam VHS domain 39 148 IPR002014 GO:0035091|GO:0043130
Phco2g01857 401 CDD VHS 39 165 - -
Phco2g01857 401 Gene3D - 217 311 IPR038425 -
Phco2g01857 401 PANTHER TOM1-LIKE PROTEIN 1 5 372 IPR044836 GO:0035091|GO:0043130|GO:0043328
Phco2g01857 401 MobiDBLite consensus disorder prediction 379 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01857 Phco-Chr2 49177072 49179273 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01857 2 49177072 49179273 Phco2g01857 2 49177072 49179273 ECH