Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01830 ATGCGTTCACCTCTGCTCATTTGCCGAGCACCATCAAATTTCCCGCTTCGCAACCTCAGTGAATTGATTCGTGAATCGCAGTTTTGGGGCTGCGATTTTTTTAGTATGGGAAATTTATTCTGTTTTTGTCTGTCATGTGACCATTTGGTGGCTTGTGGTTGTTATTGTTTTAGAGACAACCGTAACAATAGAGTTTCCCTTTTTGATGGTATCGAGGAGGGTGGCATCAGAGCACAATCTGTTTACTCATCTTCTCATGAAATTGATGAACATGATAACGAGCAGGCATTGGATGGACTGCAAGATAGAGTCAATCTGCTGAAAAGATTATCAGGTGATATCAATGAGGAAGTGGATAGCCATAACCGCATGCTGGATCGAATGGGGAATGATATGGATTCATCAAGAGGAGTCCTTTCGGGCACTATGGACAAATTTAAAATGGTATTTGAGACTAAATCCAGCCGGAGAATGTTTTCGCTTGTAGCATCCTTTGTTGTGATTTTTCTTATAATATACTATCTCACTAAGTAA 534 0.4045 MRSPLLICRAPSNFPLRNLSELIRESQFWGCDFFSMGNLFCFCLSCDHLVACGCYCFRDNRNNRVSLFDGIEEGGIRAQSVYSSSHEIDEHDNEQALDGLQDRVNLLKRLSGDINEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRRMFSLVASFVVIFLIIYYLTK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01830 177 FunFam bet1-like SNARE 1-1 94 158 - -
Phco2g01830 177 PANTHER GOLGI SNARE BET1-RELATED 61 177 - -
Phco2g01830 177 SUPERFAMILY SNARE fusion complex 82 149 - -
Phco2g01830 177 CDD SNARE_Bet1 90 147 IPR039899 -
Phco2g01830 177 Gene3D - 95 158 - -
Phco2g01830 177 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 87 149 IPR000727 -
Phco2g01830 177 SMART tSNARE_6 82 149 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01830 Phco-Chr2 48859387 48863199 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01830 2 48859387 48863199 Phco2g01830 2 48859387 48863199 ECH