Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01802 ATGGAGGTTGGCCTGAAGAAGGAGAACATGGGGTTTGAAGAAACTGAGCTAAGGCTTGGACTGCCTGGAAACGCTGCCTCAGGCACTGAAGAAGTGCTAAGGAAGAGAGGATTCTCTGAGACTGAAACTCAGGATGACACTGCCACAGTGGATTTGATGCTTAATCTTTCATCTAAGGAACCAACCACTGGAGCAGATCCAACTGATAAGCACAACACCTTGCCTAAGGAGAAGACCCTTCTGCCTGCAGATCCTGCTAAGCCTCCAGCCAAGGCACAGGTGGTGGGTTGGCCACCTGTGCGGTCCTTCCGGAAGAACATGTTAGCTGTGCAAAAGAGTGTTGGAGAAGAGAGTGAAAAGAACAGCAGCCCTAATGCAAGCTTTGTGAAAGTTAGCATGGATGGAGCACCTTATCTGCGCAAAGTGGACTTGAAGATGTATAAGAGTTACCGCGAGCTCTCTGATTCTTTAGGCAAAATGTTCAGCTCCTTCACCATTGGGAATTGTGAATCCCAAGGAATGAAGGATTTCATGAATGAGAGCAAACTGATGGATCTTTTGAACAGCTCTGATTATGTCCCAACCTATGAGGACAAGGATGGTGACTGGATGCTTGTCGGTGATGTCCCATGGGAGATGTTTGTTGAATCATGCAAGCGTTTACGCATTATGAAAGGAAAGGAGGCTATTGGCCTTGGCCTTGCACCAAGAGCCATGGCAAAAAGCAAGAACAGGAGCTAG 741 0.4764 MEVGLKKENMGFEETELRLGLPGNAASGTEEVLRKRGFSETETQDDTATVDLMLNLSSKEPTTGADPTDKHNTLPKEKTLLPADPAKPPAKAQVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTIGNCESQGMKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKSKNRS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01802 246 ProSiteProfiles PB1 domain profile. 126 226 IPR000270 GO:0005515
Phco2g01802 246 MobiDBLite consensus disorder prediction 54 94 - -
Phco2g01802 246 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 231 IPR003311 GO:0005634|GO:0006355
Phco2g01802 246 SUPERFAMILY CAD & PB1 domains 117 225 - -
Phco2g01802 246 FunFam Auxin-responsive protein 121 237 - -
Phco2g01802 246 Gene3D - 120 237 - -
Phco2g01802 246 Pfam AUX/IAA family 14 233 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01802 Phco-Chr2 48545060 48547613 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phco2g01802 AUX_IAA 1.2e-83 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01802 2 48545060 48547613 Phco2g01802 2 48545060 48547613 ECH