Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01790 ATGGGTCTGGAAAAGAATCTTCGTGTATTTTTAGATGTCTCAATTGATGCGGACCCCGTGGAAAGAATTGTTATCCAGCTTTTTGATAGTATTGTTCCAAAGACAGCCGAGAATTTTCGGGCGCTTTGTACAGGTGAGAAGGGCATTGGAGAGTCAACTGGGAAACCTTTGCATTATAAGGGAACAAGCTTTCATCGCATAATTAAAGGTTTCATGGCTCAAGGTGGTGATTTTTCAAAGGGTAATGGCACGGGTGGGGAAAGTATATATGGTGGAAAATTTGCAGATGAAAATTTCAAACTAAGACATGATGGACCTGGCTTTCTTTCTATGGCTAATAGTGGGCCTAACACAAATGGATCTCAGTTCTTCATTACATTCAAGCGCCAACCTCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTCAATGGAATGGATGCTCTGAAGAAAATTGAGCTGGTAGGAACATCCGATGGGAAACCTACCCAGACAGTTAAAATTATTGATTGCGGTGAAGTTTCTGAAACAAAAGCTCAGCATACAGTTGAGAAGGAGAAAGGGAAAAGGAGAAAATCAGGGAAACCCCTGACTTCTGATGATAGTTCTGAGTCTTCCGACCAAAAGTCAAGGGGGAAAAGAAAAAAATCTTCCAAAGACATGAAGAAAAAAAGGAGAAGATACTCAACATCTGATAGTGATAGTTATTCCTCGGATTCTGAATCAGCTTCAGATTCTGAATCGGATTCTGATTCTGATTCCTCTAGTTATGGGAAACACCAGAAGAGGAGAAATAAGCGCAAGCATGGGAAGAAGAGGAAAATTGGTCGAAACCAGAGAAAGAGAAGTAGGCACAGTCGAAGTAGAAGATCAAAGCACAAGTCTAGGCGTTCTGAGGATTCAAGTGATAGCTCTAGTACTAGTGGTAGTAGTTCTAGCGATGAGAAAGGTGATCGTCACTCCTCAGGTCGGAAAACACGTGCTGACAATAAAGCACAAAGAAATCAACACACAGAAAAGCAATCTTCTAGCCTTCCTGGACAAGATAAAATTATTCCAGAGCAAACAACGGATACCAACATTAGAAGAACTGTGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCGGAAAATGGGGCATTTGTGAATAACGGGCATGATACTCAAGCTGAATTTAGTAAACCTGCTAAACAACATGCTAATTCAGATGTTTCAAATGACAATAGAAGTGCAAGAACTGGGAGAAGTCCTACCAGGGATTCTGGTGAGCTAGAGCTAAACCAAGGACGTGCTACGTTGCTGGCTAGTTCTGGCCAAAAAGCATCTGAACCTGCAGCCCGTAAACATGGTCATGGCTTTTCAAAAAGCCCTTCACCAAATGGCATGCCTAAGCGTATTAAAAAAGGACGTGGTTTTACTGAGCGTTATGCCTTTGCCCGCAGATATCGTACTCCATCTCCTGAGTGGTCTCCTCGCACATATCGATATGGTGATAGAAATATAAGGAGGAACTTTGATAGAAACACAAGCTACAGAAGTTATTCTGAGCGATCTCCACCACGACGTTATCGAAGTCCACCTGGGGGCAGAAATCGTCCAAGATACCAAAGCAGGAGAAGTCTTAGTAGGAGCATCTCTCGCAGTCCAGTGCGTGGCCGTTTTAGAGACCGTGACCGGAGTCGAAGCCCAAGACGTAGTCTTAGTCCTGAAGACAGGCGACCTCCCATAAGTGACAGGTTAAAATCCCGACTTGGTCCAAGAAGTGATGATCGATTGGCAGACAGGAGGGGTAGGTCGAAGTCCAATTCTAGGAGCAATGGCTCATCTCACTCCAGATCCCCTGATGCTACACCACCAAAACGACATGATAAAAGGACTTCCGTATCTCGTAGCAGGTCTAGGTCCAGCTCTTCATCCGGTCAGAAGGGTTTAGTTTCTTATGGAGATGCTAGTCCTGATTCTGGGGTAAGGTAA 1980 0.4359 MGLEKNLRVFLDVSIDADPVERIVIQLFDSIVPKTAENFRALCTGEKGIGESTGKPLHYKGTSFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKLRHDGPGFLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVVNGMDALKKIELVGTSDGKPTQTVKIIDCGEVSETKAQHTVEKEKGKRRKSGKPLTSDDSSESSDQKSRGKRKKSSKDMKKKRRRYSTSDSDSYSSDSESASDSESDSDSDSSSYGKHQKRRNKRKHGKKRKIGRNQRKRSRHSRSRRSKHKSRRSEDSSDSSSTSGSSSSDEKGDRHSSGRKTRADNKAQRNQHTEKQSSSLPGQDKIIPEQTTDTNIRRTVDKQSHEEGELSPENGAFVNNGHDTQAEFSKPAKQHANSDVSNDNRSARTGRSPTRDSGELELNQGRATLLASSGQKASEPAARKHGHGFSKSPSPNGMPKRIKKGRGFTERYAFARRYRTPSPEWSPRTYRYGDRNIRRNFDRNTSYRSYSERSPPRRYRSPPGGRNRPRYQSRRSLSRSISRSPVRGRFRDRDRSRSPRRSLSPEDRRPPISDRLKSRLGPRSDDRLADRRGRSKSNSRSNGSSHSRSPDATPPKRHDKRTSVSRSRSRSSSSSGQKGLVSYGDASPDSGVR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01790 659 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Phco2g01790 659 MobiDBLite consensus disorder prediction 314 337 - -
Phco2g01790 659 Gene3D - 2 182 IPR029000 -
Phco2g01790 659 MobiDBLite consensus disorder prediction 383 414 - -
Phco2g01790 659 SUPERFAMILY Cyclophilin-like 7 176 IPR029000 -
Phco2g01790 659 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Phco2g01790 659 MobiDBLite consensus disorder prediction 497 512 - -
Phco2g01790 659 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Phco2g01790 659 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Phco2g01790 659 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Phco2g01790 659 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Phco2g01790 659 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Phco2g01790 659 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Phco2g01790 659 MobiDBLite consensus disorder prediction 338 360 - -
Phco2g01790 659 MobiDBLite consensus disorder prediction 361 375 - -
Phco2g01790 659 MobiDBLite consensus disorder prediction 261 295 - -
Phco2g01790 659 MobiDBLite consensus disorder prediction 178 215 - -
Phco2g01790 659 CDD cyclophilin_ABH_like 8 173 - -
Phco2g01790 659 MobiDBLite consensus disorder prediction 551 603 - -
Phco2g01790 659 MobiDBLite consensus disorder prediction 178 659 - -
Phco2g01790 659 MobiDBLite consensus disorder prediction 422 441 - -
Phco2g01790 659 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 175 - -
Phco2g01790 659 MobiDBLite consensus disorder prediction 633 647 - -
Phco2g01790 659 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01790 Phco-Chr2 48429924 48435503 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01790 2 48429924 48435503 Phco2g01790 2 48429924 48435503 ECH