Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01747 ATGGCTTCTCCCTTTTCCATCCACTGCCACCTTCCCTCTTTCTCTTCTTCTGACCATTTTCATCTTCCATCATCTTCTTATCCTTCTTCTTCTTCTTCTTCTTCTCCTTCTATTTTTCTTCACTTCTCCAAATCCTCTCTTGGTTCTGTGTCCTCTAATACTAAGGACAGACAAGAGATAAGATGCAGAGCTATATCCAAACCACGAACGCAAGAATATTCAGACATATTTCACGGCAGTCTTGCAATGTTAAAGATGCGTGAGATTAATGTGGAGGAGGACATAGAAGAGGAGCAAGACACTGGGGTTTTGGTGGCAAAAGAGATCAAGAAGCGAGTGGACAGTGTCAAAGCAATATTGGGTTCATTGGAAGATGGAGAGATAACTGTGTCTGCTTATGACACTGCTTGGGTTGCTCTGATAGAAGATATCCATGGAAGTGGCACCCCTCAATTTCCAGCGAGTCTAGAATGGATAGCAAAAAATCAACTTCAGGATGGATCATGGGGAGATAATGAGTTGTTTTCAGCACATGATCGGATCATAAACACGTTGGCTTGTGTTATTGCATTAAAATCATGGAATATACATCCTGAAAAGTGTGAGAAAGGAATGGCATTTTTTAACGAGAATCTTAGCAAGCTTCAGAATGAGAATGTGGAGCATATGCCAATTGGGTTTGAAGTAGCTTTCCCATCACTTCTTGACATGGCTCGTGGGTTGGACATCGAAGTGCCGGACAATTCCCCTATCCTGAACAAAATTTTTGCAATGAGAAACGTAAAACTCACAAGAATACCAAGAGAGATGATGCATAAAGTGCCCACAAGTCTGCTTCATAGCTTGGAAGGGATGTCAGACCTGGACTGGAAATCACTTCTGAAACTGCAATCTCAAGACGGGTCTTTCTTGTTTTCTCCGTCCTCCACCGCTTTTGCTCTCATGCAAACCAAAGATCAAAATTGCCACAATTACTTGAATCAAGTGGTCAAGAAGTTCAATGGGGGAGTTCCAAACGTGTATCCAGTGGATTTGTTTGAACATATTTGGGTGGTTGATAGGCTGGAACGCCTAGGAATATCTCGGTATTTTCAGCAAGAGATCAAAGACTGTTTGAGCTATGTTCATAGATATTGGACCGAAAAGGGTATTTGTTGGGCAAGAAATTCAGAAGTTCAAGACATTGATGACACTGCAATGGGTTTCAGATTACTGAGATTACATGGCCACCATGTTTCAGCCGATGTGTTCAAGCACTTTGAGAGGAACGGTGAATTTTTCTGTTTTAGCGGACAATCGACACAAGCTGTGACAGGAATGTTCAATCTGTTAAGGGCGAGTCAAGTAATGTTCCCTGGAGAGAAGATTCTAGAAGATGGGAAGAAGTTCTCTGCAAAATTTTTGAGCGCGAAGAGAGAAGCAAATGAGCTAGTAGATAAATGGATCATAATGAAAAACTTAGCAGAAGAGGTGGCATACGCATTGGATGTGCCATGGTACGCAAGTTTGCCTCGAGTGGAGACAAGATTTTACATTGATCAATATGGGGGTGAGGGTGACGTCTGGATAGGCAAGACCCTTTATAGGATGCCCTATGTGAACAACAACAACTATCTGGAGCTTGCTAAATTAGATTACAACAATTGTCAGGCACTGCATCTAATAGAGTGGGGGAAAATGCAGAAGTGGTACTCAGAATCTAGATTGGTAGAGTTTGGAATGAACAGAAGAACTCTTCTGTTGGCTTATTTTCTAGCAACAGCGAGCATATTTGAGCCTGAAAAGTCTCATGTGAGGCTTGCTTGGGCCAAAACCATGGTCTTACTTGAGACCATAACATCCTATGTTAGGGATGCAGAAAAGAAGAAAGCTTTCATGAAAAAATTCAGTGACTGCATTAGCAGGCCAGACTACTCCATTGGCTGGAGGCTGAACAGGAACAGAACAGGACATGGACTCGTTGAAACTTTGGTTGCCACCATAGATCAAATATCCTGGGATATAATTGTTTCTCATGGTCATGAAATCGGATATGATATGCATCGCAGTTGGGAAAAGTGGCTTTCAAGTTGGCACAACGAAGGAGACAAATGTGAAGGACAAGGAGAGCTTTTAGCGCAGATAATAAACCTGTGTGGCGGGCATTGGATTTCAGAGGATCAAATGTTTGATCCTCAATATGAGACTCTCTTTCAACTCACTAACACACTCTGTCATACACTCCATTGTCATCAAAAGGACAAGGAATTCGAGAGCACGATCTCCCCGGAAGTTGAGTCAAAAATGCAAGAACTGGTGCAATTGGTGTTTCAAAAATCTCCATCTGGCATTGACTTCAATATCAAGAACACTTTCCTTACAGTGGCCAAGAGTTATTATTACGCAGCTTTCTGTGATTCAAGGACCACCAACTTCCACATTGCCAAAGTTCTGTTTGATAAACGCGGCAACAACGATCTCGGCAAGGCGCTGGAGGTTCTTGACGGCGTCGAGGTCGAGAGTGATAACGTTGGAGATCTGGGAGGAGCTTGTCGAGCGGCGGCTTGA 2547 0.4276 MASPFSIHCHLPSFSSSDHFHLPSSSYPSSSSSSSPSIFLHFSKSSLGSVSSNTKDRQEIRCRAISKPRTQEYSDIFHGSLAMLKMREINVEEDIEEEQDTGVLVAKEIKKRVDSVKAILGSLEDGEITVSAYDTAWVALIEDIHGSGTPQFPASLEWIAKNQLQDGSWGDNELFSAHDRIINTLACVIALKSWNIHPEKCEKGMAFFNENLSKLQNENVEHMPIGFEVAFPSLLDMARGLDIEVPDNSPILNKIFAMRNVKLTRIPREMMHKVPTSLLHSLEGMSDLDWKSLLKLQSQDGSFLFSPSSTAFALMQTKDQNCHNYLNQVVKKFNGGVPNVYPVDLFEHIWVVDRLERLGISRYFQQEIKDCLSYVHRYWTEKGICWARNSEVQDIDDTAMGFRLLRLHGHHVSADVFKHFERNGEFFCFSGQSTQAVTGMFNLLRASQVMFPGEKILEDGKKFSAKFLSAKREANELVDKWIIMKNLAEEVAYALDVPWYASLPRVETRFYIDQYGGEGDVWIGKTLYRMPYVNNNNYLELAKLDYNNCQALHLIEWGKMQKWYSESRLVEFGMNRRTLLLAYFLATASIFEPEKSHVRLAWAKTMVLLETITSYVRDAEKKKAFMKKFSDCISRPDYSIGWRLNRNRTGHGLVETLVATIDQISWDIIVSHGHEIGYDMHRSWEKWLSSWHNEGDKCEGQGELLAQIINLCGGHWISEDQMFDPQYETLFQLTNTLCHTLHCHQKDKEFESTISPEVESKMQELVQLVFQKSPSGIDFNIKNTFLTVAKSYYYAAFCDSRTTNFHIAKVLFDKRGNNDLGKALEVLDGVEVESDNVGDLGGACRAAA 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01747 848 FunFam Ent-copalyl diphosphate synthase 132 344 - -
Phco2g01747 848 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 105 529 - -
Phco2g01747 848 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 132 315 IPR008930 -
Phco2g01747 848 Gene3D - 116 547 IPR036965 GO:0010333|GO:0016829
Phco2g01747 848 Pfam Terpene synthase, N-terminal domain 289 495 IPR001906 GO:0010333|GO:0016829
Phco2g01747 848 Gene3D - 132 344 - -
Phco2g01747 848 CDD Terpene_cyclase_plant_C1 340 813 IPR044814 GO:0010333|GO:0016102
Phco2g01747 848 Pfam Terpene synthase family, metal binding domain 539 698 IPR005630 GO:0000287|GO:0010333|GO:0016829
Phco2g01747 848 FunFam Ent-copalyl diphosphate synthase, chloroplastic 549 815 - -
Phco2g01747 848 Gene3D Farnesyl Diphosphate Synthase 549 818 IPR008949 -
Phco2g01747 848 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 107 813 - -
Phco2g01747 848 FunFam Ent-copalyl diphosphate synthase, chloroplastic 322 546 - -
Phco2g01747 848 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 300 520 IPR008930 -
Phco2g01747 848 SFLD Terpene Cyclase Like 1 N-term 105 529 - -
Phco2g01747 848 SUPERFAMILY Terpenoid synthases 534 796 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01747 Phco-Chr2 47858704 47868571 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01747 2 47858704 47868571 Phco2g01747 2 47858704 47868571 ECH