Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01745 ATGGCTTCTCAATTTGCCTTCACTCTCACTCACAGGCTTCCTTCATCATGTGCCACACCAGCAGCTAAATCCTTTGACTCTGTTAGTTTTTACCTTCGATCATCATACGGTATTTTCAGGGGTATTCGTCCTCCCCTCCTATTCACAGAAAGCAAACATACCAAGACTAGTGGAGTTCAACCAATATGCTCTCGGACTCTAGAAATTGTTGCTGAAGTGTCTCAGGACAATATCTGGAATGATGACAAGGAAGCCTTGAATATTTTGGTAACAAAGGAGATACAGAAGAAAATAAATGTGGTAAAATTAATATTGGATTCAAAGGAAGATGGAGAAATAACAATATCAGCATATGACACGGCATGGGTTGCTCTAGTGAAAAATGTTGGGGACACCAATTCTCCTCAGTTCCCTTCCTGTCTTGAATGGATTGCAAATAACCAGCTGCATGACGGTTCCTGGGGAGACGCTGAACTATTCATTGCCCATGATCGTATTCTCAACACGTTAGCTTGTGTGCTTGCATTAAGATCATGGAACATGCACCCTCAAAAGTGTGAGAAGGGAATGAAGTTTTTTAAAGAGAATCTGTACAAGCTTCAGGATGAGAATCCAGAACATATGCCAATCGGGTTCGAAATTACTTTCCCTTCTCTTCTGGATTTAGCTAGAAGTTTGGATGTTGAAGTGCCAGATGAGTCTCCTATCTTGAAAAACATCATTGCGATGAGAGACGTGAAGCTTAAGAAAATACCAAGAGAGATTCTGCACAAAGTGCCTACAACACTGCTCCATAGTTTGGAGGGAATGCAAAATTTAGACTGGAAAAAGCTACTGAAGTTGCAGTGCCAAGACGGGTCATTCTTATTCTCTCCATCCTCCACAGCTTATGCTCTCATACAAACTAAGGATGAAAGTGCTCACAAATACCTGGATAAAACACTCCAGAGGTTCAATGGGGGAGTTCCTAATGTCTACCCGGTGGATTTGTTTGAACACACATGGATCTTCGATAGACTTGATCGTCTTGGAATTTCAAGATATTTTCAGTCAGAGATCAAAGACTGCGTGACATATGTTTCAAGATATTGGACTGAGAAGGGTATTTGCTGGGCAAGGAATTCAGAGGTTCAAGATATAGATGACACAGCAATGGGATTCAGACTACTAAGGTTGCATGGGCACCAAGTTTCAGCCAGTGTGTTTAAGCACTTTAAGAAAAATGGGGAATTTTTCTGCTTTTCTGGGCAGTCAAACCAAGCCGTGACAGGAATGTTCAATCTCTATCGAGCATCTCAAGTGCTATTTCAAGGAGAGAAGATTCTTGAAGATGCCAAGAACTTCTCAGCCAAATTTTTAACTGAGAAACGTGAAGCAAATGAGCTCCTAGATAAATGGATCATAACAAAAGATTTACCTGGCGAGGTGGGTTATGCTCTGGACATGCCCTGGTATGCTAGCTTGCCAAGAGTGGAGACAAGATTTTACCTTGAACAATACGGAGGTAGCAGTGACGTTTGGATTGGCAAGACCCTTTATAGGATGCCCTTCGTGAACAATGATGTTTATCTCGAGCTTGCAAAATTGGACTACAGTATCTGTCAAGCAGTGCATTGTGCAGAATGGGAAAAAATCCAAAGGTGGTACTCGGAAGCAGGACTAGAGAGATTTGGATTGAGCAAACAAAGTCTACTATTTGCTTACTTTATAGCAGCAGCCAGCATATTTGAGCCTGAGAGGTCGAGAGAGAGACTTGCATGGGCTAAAACTGCAACATTGCTCGAGACGCTTGGGTCCTACATAAAAGATGAACAAACTAGGCATGCTTTTGTAGATTTGTTCAACAACAGCATTAACGGACGAAACTTATCCAACAAGAAGTTGAACAAGAACAAGAGAGAGGAAGAACTCCTGGAGATTTTGCTGACAAACCTTGATTACCTTGGGTTCGAAATGCTTCGGAGTCATGGTTATGAATTGTCCCGTTATTTGAATCAAGCATGGCAGGATTGGCTATCAAGTTGGCAGAATGAAGGGAACAGCTTGGAAAGAGAAGCTGAGTTGATTGTGCAAATCATAAATGTAATGGCTGGCTATTGGTCAGAAGAACTACAGCTGAATCCACAGTACCAGAGGTTGCTCCAAACTACTAATAGAGTCTGTCATGGACTCCGTAATTATCAAATCAGCAAGGCACATGATAGTGGCAGCGACAAGAGGACAACCTGCATGGCTACCCCTCAAATAGAATCTGACATGCAAGAACTTGTGCAATTGGTGCTCCAAAATTCCTCAGATGGGGTGCACACCAATGTGAAGAATTCATTCCTCACAGTGGCCAAGGGCTTCTACTACCGAGCATATTGTGACCCAGAAACCATAAACTCTCATATTGAAAAAGTTCTCTTTGAAAGAGTGATGTAA 2424 0.4204 MASQFAFTLTHRLPSSCATPAAKSFDSVSFYLRSSYGIFRGIRPPLLFTESKHTKTSGVQPICSRTLEIVAEVSQDNIWNDDKEALNILVTKEIQKKINVVKLILDSKEDGEITISAYDTAWVALVKNVGDTNSPQFPSCLEWIANNQLHDGSWGDAELFIAHDRILNTLACVLALRSWNMHPQKCEKGMKFFKENLYKLQDENPEHMPIGFEITFPSLLDLARSLDVEVPDESPILKNIIAMRDVKLKKIPREILHKVPTTLLHSLEGMQNLDWKKLLKLQCQDGSFLFSPSSTAYALIQTKDESAHKYLDKTLQRFNGGVPNVYPVDLFEHTWIFDRLDRLGISRYFQSEIKDCVTYVSRYWTEKGICWARNSEVQDIDDTAMGFRLLRLHGHQVSASVFKHFKKNGEFFCFSGQSNQAVTGMFNLYRASQVLFQGEKILEDAKNFSAKFLTEKREANELLDKWIITKDLPGEVGYALDMPWYASLPRVETRFYLEQYGGSSDVWIGKTLYRMPFVNNDVYLELAKLDYSICQAVHCAEWEKIQRWYSEAGLERFGLSKQSLLFAYFIAAASIFEPERSRERLAWAKTATLLETLGSYIKDEQTRHAFVDLFNNSINGRNLSNKKLNKNKREEELLEILLTNLDYLGFEMLRSHGYELSRYLNQAWQDWLSSWQNEGNSLEREAELIVQIINVMAGYWSEELQLNPQYQRLLQTTNRVCHGLRNYQISKAHDSGSDKRTTCMATPQIESDMQELVQLVLQNSSDGVHTNVKNSFLTVAKGFYYRAYCDPETINSHIEKVLFERVM 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01745 807 Gene3D Farnesyl Diphosphate Synthase 534 807 IPR008949 -
Phco2g01745 807 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 115 196 IPR008930 -
Phco2g01745 807 Gene3D - 101 531 IPR036965 GO:0010333|GO:0016829
Phco2g01745 807 FunFam Ent-copalyl diphosphate synthase, chloroplastic 307 531 - -
Phco2g01745 807 SFLD Terpene Cyclase Like 1 N-term 90 514 - -
Phco2g01745 807 Pfam Terpene synthase family, metal binding domain 524 679 IPR005630 GO:0000287|GO:0010333|GO:0016829
Phco2g01745 807 FunFam Ent-copalyl diphosphate synthase 117 329 - -
Phco2g01745 807 Gene3D - 117 329 - -
Phco2g01745 807 Pfam Terpene synthase, N-terminal domain 274 480 IPR001906 GO:0010333|GO:0016829
Phco2g01745 807 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 91 804 - -
Phco2g01745 807 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 90 514 - -
Phco2g01745 807 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 285 504 IPR008930 -
Phco2g01745 807 SUPERFAMILY Terpenoid synthases 519 781 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01745 Phco-Chr2 47832575 47838103 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01745 2 47832575 47838103 Phco2g01745 2 47832575 47838103 ECH