Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01744 ATGGATCGAACCAGAGGAAGATCGTCCTCTATGTCCGCAAGCGCCTTCCCTAGACGCCGTCACCCTAATATCTCCCTCCGACCCACTTCTCAGGAGGTGCAGGAGATAAGGTTAAAGGATGATAATGATGACGATGATAATAATAATAAGAGGGAATGGACGAAGAAGAGGAGAGGGAGCAACTCTCACAGCACCGAGGAAGAGAGTGTGGGGAATGAACAAGACGCGCGGTTGCATTCTAATAATACGGCGTCGTCCGCATCTGATCATAACCACCGTGGACGGAACGTAATCGATGAAGTGATGATCGGAGCTACAGTGCCCAGGAGGACTCGTTCAGCTTCTGTGAAAAGACCGCATCACAGTTCGGTCGAGGAGCAGAGTGCTGAAGCTGCGTCGCCTTCTTCTTCCAATGTTTCTCTTCCCAAGAGGATGAAAGCGATTGGACCTTCTTCGTCGAATCAGGAGGACATTGAGATTGAGATAGCTGAGCTTCTGTACAGTTTAAGAGCTTCCCAGAACCATGATTATTCTTCTTTGCGGAAGGTTGAAGCAAGTGATTCGCCTCCACTTTCGTTTTACCCTGCCATTGATGTTGAGAAGAAGAAAGTGGAAGGATACAGTCCTTTTTTCACTCTACCTCCGAACAATTCAGTTCCCGAGTCTGTCGTAATTGAGTGCCAGCAACCTGCGAAAACGGAGAAAACTTCGTCCGAATCGCCTAGGACGTCTGGTGGTCATGGAATTGGATCTTCCCAGGGTCCAAAGCAGGAAACAGACGGAAATAATTTGAGTCCAGGTGGTGGATGTGGAGATGCTGTAGATAGAAAATCAGAATCCATGTTGGATGTCGACAAACGTGATTGTGCAAGGACATGCGATGATGTTTCTGGCGGCAATGACAAACACAAGTTTGAAATTGATCTAATGGCTCCCCCTCCTGTGACCTTATCGCCAGAATGGGATAACTTGTCTAGGGGTGAAGACAGTAACAAGGTTGAAAACAAGGTAAAAAGTTTCAGTAAGAAGGAGGAAACACTGGGAGAAATTGAAGTGGTGAAAATGAAAGTTGATTTGGAGAAGTCAAATGAACATAATGACCTAGCGACAAACCATGAATCAGGAGAGCTGGGTAGGAATACGGAACAACCATCTACTATATCTACTAATCCCAAACTGGAGAAAACTGCTCAATGTAGTGCAATGTCTTTTTCAGTGGCTGTATCCGAAAGGTCAAGCAGTTTCTCTCCCCTTGGTTACATGCCGCCCATGGGGACAGCTGTGAAGACAGATAAAACAACAGGATTATTGACAGCCCCTCAACATGGGAACTTTGCTCTGTCTCAACCTCGACCCAAGAGATGTGTAACCCATGGTTACATTGCTCGGAACATCTTCATGCACCAACAATGCACAAAGATGAATACCCTTTTGCCGTCTGCAATTGGCTGTGGTTCTATGTGTGACACAAAGCTCAGCAAAGTCCATTCAGCTGAAAGTGTAGTTGTTGGGAAGCAGTTTCATAAACAGTCACCAGTCGTCAGCCATAATGCTGAACCGGAGAAGGGATGGGCTACCTCTAGTGATTTTAGTCTTCCTGCAATTAAAAGAAGTTCTGGTCCTGCCAACTCAATGGATATGACCCAAATGAAGCAGCTTATGCTTCAGCAAGGTCCACATGCAGGGTCTTCTGCTAATATAGTGCATGGTCCTGCTTTTCTAATTCCTCATGGCCAGCATCAAGCATCTGTAATAACAGGTACTAGTCCAGCTGGTGGTGTGAACAACGCTAGCAGTACTTCCTTGTCTAATAAATTCCAAAGTTCCCCAGCTGTATCTCTTGGTGCCCCAACACTGCCAGCGGTTGCTGCTGCAATGAGCTTTAGCTACCCTAATTTGGCAGCCAATGATGCTCCATACATGACAATAGTTCCGAATAGTGGCTATCCATTCCCCTTCTCAACTCCCCTTGGACCATCTGCAACTATCAGAGGTGCAAGCCCTGCACAGTCAACACCTATTCTCAATGGACCTTTGTACTCTTCTCAGATCTTCCACCCACTTCAGTATTCACAACAGCATCCTCACTCCCAACCACTTGTTCAACCAAGTTATCTTAATGCAAGCACATCTAGTGTTTCATCATCATCCCATAAGCAGTCGCAGGGAATGCAAGGTAACAACAACCATATTTTGTCATCCACAACTATGCAACTTCAGCAGTCACAAAAGCAGCACACCTCACAATCTCATCTTCGCAAGCATGAGACTGGGATGGCCAGAGAGAATGCTCCATCTGCTGCAAGTGGAACAGCTTACTCCCAAAAGCATGTATTTGGGCAAAACTTCCCTATTCCAGTTCAGCCACTGAGCCTTTCTTTAACGCCGTCTGCAACATCAGATAGTGTTGGTGGCAACAGTGGAAATTTTGGTGACAAGCAGCAACAGACTTTGATGGGGGGACTTGAGCATATTCCATCTCAACCACATGCAATCTCATTTGCTGCATATAATGGGACAAGTGTTCCTTCAAATCTGAACTTCTCAACCGTGGCACAAAACCCAGTGATATTTCAGAGCCTGCCAGATATTGCATGGCAAGGATATCATGCTGCAAGTACATCTCATGCAACTCAACAAAAGATGTATCCTATAATAGAAGGGAACAGTGGGGATAGTTCTTCCCACCGAGATGATGAAAAGAAAGCCACTTCCGGGAAGCCATCAACCAACGGACCAACGACCCTTGTTTTTGATAATTCAGCAAAGAATCTTAACTTAGTTTCATCTCCCATGAATGGAAATTGGCCTAGTGGTTCCATTACTTCAACTGCAACAACCACAAGTTTGCCTCTTTCTAGTAATGCTGCAAAGTCTCAACAGCCATCACAGCTGCTTCATCTTCAGCAGCAGCATGGAATGTTACAGCAGCAACCTGCTATGGCTACTCGATATAAAGCCTCGTCAACTAATGCTACAAGTGGTGCAAATTTTTTTACTTCCCCAGTTTATTCACAAGCTCAAACTCAGAGCAAAAGTTCGATTAAAGGCTCCCAGTCTAAAATCTGTGTAACAGCCCCGGATTCTGTTGTTCATAACCCATGTATCATAACTTCTACTGCCCCAACTCTCCAAAGTTTTTCTCAGGATCAAGGAAGAGTTTTGCAGGGTCATACCCAAATATCTTTTGGTGGAAATTACATATCGTCCATGCCACTCCAAGGGCAACAACTATTCAATAACAACCACTCTCTTGGTACAACACTTGCAGGAATTCCACCTAGTGGAGCCAACTTGAAGACAAATTCCCAGGGGAGCAAGGTTAGTTCATCAGTGAACTCTTCGCAGATGCAACAAACTGAGAATTCTTCAACTGGAACTGGCCAAAAATCTTCCCCAGTTTGTGGGAGAAATGTCCCATCGATCTTGAGCTCGTGCCCCAGTCACTTATCTGAGCTTAAGTATTAG 3468 0.4533 MDRTRGRSSSMSASAFPRRRHPNISLRPTSQEVQEIRLKDDNDDDDNNNKREWTKKRRGSNSHSTEEESVGNEQDARLHSNNTASSASDHNHRGRNVIDEVMIGATVPRRTRSASVKRPHHSSVEEQSAEAASPSSSNVSLPKRMKAIGPSSSNQEDIEIEIAELLYSLRASQNHDYSSLRKVEASDSPPLSFYPAIDVEKKKVEGYSPFFTLPPNNSVPESVVIECQQPAKTEKTSSESPRTSGGHGIGSSQGPKQETDGNNLSPGGGCGDAVDRKSESMLDVDKRDCARTCDDVSGGNDKHKFEIDLMAPPPVTLSPEWDNLSRGEDSNKVENKVKSFSKKEETLGEIEVVKMKVDLEKSNEHNDLATNHESGELGRNTEQPSTISTNPKLEKTAQCSAMSFSVAVSERSSSFSPLGYMPPMGTAVKTDKTTGLLTAPQHGNFALSQPRPKRCVTHGYIARNIFMHQQCTKMNTLLPSAIGCGSMCDTKLSKVHSAESVVVGKQFHKQSPVVSHNAEPEKGWATSSDFSLPAIKRSSGPANSMDMTQMKQLMLQQGPHAGSSANIVHGPAFLIPHGQHQASVITGTSPAGGVNNASSTSLSNKFQSSPAVSLGAPTLPAVAAAMSFSYPNLAANDAPYMTIVPNSGYPFPFSTPLGPSATIRGASPAQSTPILNGPLYSSQIFHPLQYSQQHPHSQPLVQPSYLNASTSSVSSSSHKQSQGMQGNNNHILSSTTMQLQQSQKQHTSQSHLRKHETGMARENAPSAASGTAYSQKHVFGQNFPIPVQPLSLSLTPSATSDSVGGNSGNFGDKQQQTLMGGLEHIPSQPHAISFAAYNGTSVPSNLNFSTVAQNPVIFQSLPDIAWQGYHAASTSHATQQKMYPIIEGNSGDSSSHRDDEKKATSGKPSTNGPTTLVFDNSAKNLNLVSSPMNGNWPSGSITSTATTTSLPLSSNAAKSQQPSQLLHLQQQHGMLQQQPAMATRYKASSTNATSGANFFTSPVYSQAQTQSKSSIKGSQSKICVTAPDSVVHNPCIITSTAPTLQSFSQDQGRVLQGHTQISFGGNYISSMPLQGQQLFNNNHSLGTTLAGIPPSGANLKTNSQGSKVSSSVNSSQMQQTENSSTGTGQKSSPVCGRNVPSILSSCPSHLSELKY 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01744 1155 MobiDBLite consensus disorder prediction 211 282 - -
Phco2g01744 1155 MobiDBLite consensus disorder prediction 373 393 - -
Phco2g01744 1155 MobiDBLite consensus disorder prediction 33 74 - -
Phco2g01744 1155 PANTHER PROTEIN TIME FOR COFFEE 1 187 IPR039317 GO:0042752
Phco2g01744 1155 MobiDBLite consensus disorder prediction 691 772 - -
Phco2g01744 1155 MobiDBLite consensus disorder prediction 885 916 - -
Phco2g01744 1155 MobiDBLite consensus disorder prediction 691 747 - -
Phco2g01744 1155 MobiDBLite consensus disorder prediction 1 154 - -
Phco2g01744 1155 MobiDBLite consensus disorder prediction 75 91 - -
Phco2g01744 1155 MobiDBLite consensus disorder prediction 211 264 - -
Phco2g01744 1155 MobiDBLite consensus disorder prediction 126 154 - -
Phco2g01744 1155 MobiDBLite consensus disorder prediction 1090 1138 - -
Phco2g01744 1155 MobiDBLite consensus disorder prediction 362 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01744 Phco-Chr2 47815143 47819635 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01744 2 47815143 47819635 Phco2g01744 2 47815143 47819635 ECH
Phco2g01744 2 47815143 47819635 Phco6g00945 6 9220896 9225722 PCT