Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01727 ATGGAATCAACTCATGTAATAGCCATTACAAATAGTGAAGAGGATAATATAAGGAAGGAGAATAAAATGTTCCAATTTCAACTTCCACTTGGGAAAAATGAAGCTCATTGTCTCTCCACCATTACTTCCAATCCCAGACACAAGCAGATGCATAGAGACCAAGACACCAGGAAGATTATCCACTGCATCAAAGTGGGAATCTCCTTGGTTTTGGTTTCACTCCTCTACCTCTTGAATCCTCTCTTTAAGCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACAGTTGTTGTCATGTTTGAATTCTCTGCAGGAGCCACACTAGGAAAGGGCTTCAACCGTGGACTAGGAACTATTATAGGAGGAGGACTAGGTTGCTTAGTAGCACTTTTTGCCCAAAGCATTGGGATTCACAGGGTTGGCAACTCGATTATAATCGGTGTTTCTGTTTTTATATTCGGATCATTTGCGACATATCTTCGACTGATTCCAAGCATAAAGAAAAGATACGATTATGGAGTGATGATATTCATTCTGACTTTCAATCTAGTTGCGGTTTCTGGCGCACGTGTAAATGTTAAAGTCTGGGAATTAGCCCGCGAACGTCTCTTGAATATACTGATGGGCTTCATTGTGTGCGTTTGTGTAAGCTTGTTCGTCTTTCCTTTGTGGGCAAGTGATGAACTTCACGATTCCATCGTCTCCAGATTCCTTGACCTTGCCAATACAATTCAAGGTTGTTTAGGCGAATGTACCAAAATCATTGATGAAAAGGAAAATCAACCCCGCGCTAGCTTCAACGTTTGCAATTCAGTGTTGAACTCCAAGTCAAAGGATGAATCATTGGCAAATTTCGCAAAATGGGAACCCTGGCATGGAAAATTTGGATTGTCCTACCCTTGGGAAAGGTACTTAAAGATTGGAGAGATTCTTCGAGAAATGGCTGCATTTATTCTTGCAACGGGTCGTTGCCTTGAAGCATCAAAAGAGCCCATGGCCACTTTGAGAGAATCACAATGGGTCCATTTAGAAACATGCAAAGCACTTGAGTCAAAGGTTGCGTGCATTCTGCGAGAACTAGGAGACAGCATTAAGAAAATGATGAAATGTGATGCAAAGGGTTGCGTTTCGGAGCAGTTGAAAGCCGCCAGAGAAGATTTAAGCTTCATAATTTCCACCTCCAAAATGGTACAACTTGAGGATGCTCAAGTGCTAGCCATTGCTACCTTCGTGTTCTTGCTCATGGAACTCATAGGGAAGGTTGAGGAATTGGCCAAACAGGTGGAGGAACTTGGAGATATCGCTGGTTTTCGCACCCCAATAACTGCATTTTCTTAG 1338 0.423 MESTHVIAITNSEEDNIRKENKMFQFQLPLGKNEAHCLSTITSNPRHKQMHRDQDTRKIIHCIKVGISLVLVSLLYLLNPLFKQVGENAMWAIMTVVVMFEFSAGATLGKGFNRGLGTIIGGGLGCLVALFAQSIGIHRVGNSIIIGVSVFIFGSFATYLRLIPSIKKRYDYGVMIFILTFNLVAVSGARVNVKVWELARERLLNILMGFIVCVCVSLFVFPLWASDELHDSIVSRFLDLANTIQGCLGECTKIIDEKENQPRASFNVCNSVLNSKSKDESLANFAKWEPWHGKFGLSYPWERYLKIGEILREMAAFILATGRCLEASKEPMATLRESQWVHLETCKALESKVACILRELGDSIKKMMKCDAKGCVSEQLKAAREDLSFIISTSKMVQLEDAQVLAIATFVFLLMELIGKVEELAKQVEELGDIAGFRTPITAFS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01727 445 Pfam Aluminium activated malate transporter 54 432 IPR020966 GO:0015743
Phco2g01727 445 Coils Coil 414 434 - -
Phco2g01727 445 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 52 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01727 Phco-Chr2 47566755 47568589 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01727 2 47566755 47568589 Phco2g01727 2 47566755 47568589 ECH
Phco2g01727 2 47566755 47568589 Phco6g00933 6 9012196 9015220 PCT