Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01722 ATGAAACTCGTCAGGTTTCTCATGAAGCTGAACAACGAAACCGTTTCGATTGAGCTTAAGAATGGCACTGTTGTTCACGGCACCATTACAGGTGTTGATATCAGTATGAATACTCATTTAAAAACAGTTAAACTAACTCTGAAAGGGAAAAACCCAGTTACTTTGGATCATTTGAGCGTGAGAGGAAACAACATTCGCTATTATATCCTTCCTGACAGTTTGAATCTTGAGACATTACTGGTTGAAGAGGCTCCAAGGATCAAGCCTAAGAAGCCAACCGCTGGGAAGCCTTTGGGGCGAGGTCGGGGACGAGGGCGTGGACGTGGCCGTGGTCGTGGCCGTTAA 345 0.458 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEEAPRIKPKKPTAGKPLGRGRGRGRGRGRGRGR 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01722 114 FunFam Small nuclear ribonucleoprotein Sm D1 1 82 - -
Phco2g01722 114 SMART Sm3 5 70 IPR001163 -
Phco2g01722 114 MobiDBLite consensus disorder prediction 93 114 - -
Phco2g01722 114 SUPERFAMILY Sm-like ribonucleoproteins 4 113 IPR010920 -
Phco2g01722 114 Gene3D - 50 82 - -
Phco2g01722 114 Gene3D - 1 49 - -
Phco2g01722 114 Pfam LSM domain 5 69 IPR001163 -
Phco2g01722 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 4 113 IPR027141 GO:0006396
Phco2g01722 114 MobiDBLite consensus disorder prediction 85 114 - -
Phco2g01722 114 CDD Sm_D1 2 93 IPR034102 GO:0000387
Phco2g01722 114 ProSiteProfiles Sm domain profile. 2 74 IPR047575 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01722 Phco-Chr2 47530100 47539977 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01722 2 47530100 47539977 Phco2g01722 2 47530100 47539977 ECH