Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01717 ATGTTGCATGAGCTGAGGCTGGCCATGAGGGAGTTCCGACCTCAGAATTTCGTGTACGATTCTGAGGATATTCCATTTGGGACTCCGTTGTGGTTCCTTTATGCTGGAATTTCTTGCTTGCTTGTTCTCTTCGCTGGGATCATGTCTGGTCTCACTCTTGGATTAATGTCTCTGGGTCTCGTTGACCTTGAGATTCTCCAGCGGAGTGGTTCCTCCACCGAGAAGAAACAAGCTGCTGCTATTTTCCCGGTTGTTCAGAAGCAGCATCAGTTGCTTGTCACCTTGCTTCTTTGTAACGCTTGTGCCATGGAGGCACTTCCAATTTACCTTGACAAAATTTTTCATCCGTTTGTAGCAGTACTGTTATCTGTGACTTTTGTTCTATCTTTTGGAGAGGTTATCCCACAAGCTATATGCACAAGATATGGGCTCTATGTTGGTGCTAATTTTGTGGGGCTTGTACGTGTTCTGATGATCATCTGTTATCCAATTGCTTATCCTATTGGAAAGGTTCTGGATGTTTTACTTGGACATAATCATGCATTATTTAGGAGAGCACAGCTGAAAGCCCTTGTTTCAATCCATAGTCAAGAGGCTGGTAAGGGAGGTGAACTCACTCATGACGAGGCAACAATTATCAGCGGAGCACTAGATCTCACGGAGAAGACTGCGGAGGAGGCCATGACACCAATTGAATCTACATTTTCCTTGGATGTGGTTTCCAAATTGGACTGGGAAGCAATTGGGAAAATTCTTTCACGAGGCCATAGTCGTGTTCCTGTATACAGTGGAAACCCCAAAAATATAATTGGCCTCTTACTGGTAAAAAACCTTCTTACTGTAAGAGCTGAAACAGAGACCCCAGTTAGTGCTGTTTCCATCCGGAGAATTCCTAGAGTTCCAGCAGATATGCCTCTATATGATATCCTCAATGAGTTTCAAAAAGGAAGCAGTCATATGGCAGCCGTAGTCAAGGTTACACGAGAGACAAAGTACCCTCTGGCAACTGGTAACATTGACAAATCCAAGGATAAAGAAGTCATGAAGCATAGTTCTCAAATAACTATGCCATTGCTAGCCAGGTTTTGCGAGAAATCAGAAAAAGTTGTCAATATTGACAAACCCTCTAAGCATGCTGCAGACCAACAATTTCAGAAGGATGTCACTGCAACAAATGGTGCCCACCACTCTCTTGACAATGTTGACGATGGGGAGGAAGTTATTGGCATCATTACCTTAGAGGACGTGTTTGAAGAACTCCTTCAGGAAGAAATTGTGGACGAGACTGATGTGTATATAGATGTACATAGAAGAATACGTGTGGCTGCTGTAGCAGCTGCTACATCTGTGGCACGGGTTCCTTCTGGCCGAAAGTTGACAGGTCACAAGCCTGTAGTAACTCAAAATCAGGGGAATTAA 1419 0.439 MLHELRLAMREFRPQNFVYDSEDIPFGTPLWFLYAGISCLLVLFAGIMSGLTLGLMSLGLVDLEILQRSGSSTEKKQAAAIFPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHPFVAVLLSVTFVLSFGEVIPQAICTRYGLYVGANFVGLVRVLMIICYPIAYPIGKVLDVLLGHNHALFRRAQLKALVSIHSQEAGKGGELTHDEATIISGALDLTEKTAEEAMTPIESTFSLDVVSKLDWEAIGKILSRGHSRVPVYSGNPKNIIGLLLVKNLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVTRETKYPLATGNIDKSKDKEVMKHSSQITMPLLARFCEKSEKVVNIDKPSKHAADQQFQKDVTATNGAHHSLDNVDDGEEVIGIITLEDVFEELLQEEIVDETDVYIDVHRRIRVAAVAAATSVARVPSGRKLTGHKPVVTQNQGN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01717 472 FunFam DUF21 domain-containing protein At4g14240-like 209 346 - -
Phco2g01717 472 PANTHER METAL TRANSPORTER CNNM 17 445 IPR045095 GO:0010960
Phco2g01717 472 SUPERFAMILY CBS-domain pair 214 422 IPR046342 -
Phco2g01717 472 Gene3D - 209 356 IPR046342 -
Phco2g01717 472 Pfam Cyclin M transmembrane N-terminal domain 37 208 IPR002550 -
Phco2g01717 472 CDD CBS_pair_CorC_HlyC_assoc 223 324 IPR044751 -
Phco2g01717 472 ProSiteProfiles CNNM transmembrane domain profile. 27 209 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01717 Phco-Chr2 47477931 47482904 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01717 2 47477931 47482904 Phco2g01717 2 47477931 47482904 ECH