Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01714 ATGCCGCCTAGTCGGAGGAAGGGAGGGAAAAAAGCGGCGGCGGCCGCCGCCGCTTGCAGTCAGTTTAAGGTCGGCGATCTCGTGCTTGCTAAGGTTAAGGGATTCCCTGTCTGGCCTGCGACGGTGGATGAGCCGCACAAGTGGGGTTACTCTGCTGATAGGAAGAAAGTATTTGTTTACTTCTTTGGAACCCAACAAATAGCATTCTGTAATCCTGCCGATGTAGAAGCATTTACTGAAGAGAAGAAACAATCTCTTGCTAAACGTCCAGGAAGGGGTGCTGATTTTGCACGTGCAGTCAAGGAGATTATTGAAAGTTATGAAAAATTGAAGAGTGAGAATCTAGATGATGATGACACTAGCTTTGACGGTGAAGTTGCCATTGCAAGTTTGTCAAATCCAACTGATCCATCTGCAAACATATGGTTAAAGGATCAGATTGAGGCTCCTTTGGCAATTAATTCACAAATGAAATCTTCAAATTGTGTGAGTAACAGACCTGAGGTAGTTTGTGCAGCTGAGGATGCTGTTGCATTGAGGAATGAATCTTATAATATAGAGGCATCATTGGATGAACCTACTGATAATGCTATTGTGGCTGCAACTGTAAAATCACCTTTTCCAATTACCCTTAGAAATGAACCAGTTCGAAGGTCTAGAAGCACATTACAGGTCCAAGACTTTGTTGTACCTTGTAGTGATGGTGAAAATAACGGTGATGGCAAAGTATTAGATGATTCAATTCCAAATAGGGATATACGAAGGAGTAAATGTATCAGGAAATCTCCTGATCTTTTAGGTTGCGATGATACTAATTCACTTGCATTTGCCTCAAATTTTAACATGGAGGATAATGATTCTGAAATTATTACAATAAATTCTGATGACTTTACTTTAAATGAGGGAAGTACAATAGATTCTAATTTAAAAAGTGAACAGTCTGAGCCTATTGGGTGCCCTGAAGGCGAAGATGATTTGAACAAAGGCCTTGATGTAGAAATAAAGACTGTAATCAGCAAGAAGAAAAGAAGACCAAACAGGAAGAAAGAAACCAATGATGATGGTGCTCGGAATGCCAGTCCAATTTTGCTGAATATGTGTGAAAATTCAAAAGAGAGATGCCCTGTCCAAGATGGAGACGAACATTTGCCCTTATTGAAACGAGCCAGAGTTAGAATGAATAAATCATCATCAGAGGCAGAAGAACTTAATAGCACTGTAGAAGTCCAGGTGAAGAGTGATGATGAAGATATTACTGACTCACCACATCAGATAATCACATCCTCAAATTGTGAAAATGGTAGCCTTGCTGAAGGAGGCTCATCAGTCTTGAATGAAGCTTTGGTTAATGTTTCTCCTTCTAACTTAATAGCTCCATGTTCAGAAAATGGTTCTCATATTTGTAAAACTAAGAAAGACCAAGTGATTGGCTTTTCTGTGAATGATGAAGCTGCTTTACCTCCATCTAAACGTATCCATCGTGCTTTAGAAGCAATGTCTGCCAATGCTGCTGAAGAAGGTCAAGCTTGCATGGAATCATCATCCTCTGTAATGGCATCAACTGGTAGGTGCTGTATATCTACTATCAAGAAATGTCTTTGTATGACTGTTAATAATGAAGGAGGTAACGATTTAGAACTTCAAAGGTTGGATTATTGTGGCATTGATTCTTCTCATGTTAGCGTGTGTAGTTTCTCAACTCATTCAAATACAATTATTTCCATAGAGAATGAGTCATCTATAGAAGTGGATAAACATTTGGCCAAGTACGAAAATGAAGCTGGCAAGGATGCCATCCCTGGTGATAGACAGCAAGTTGGGGAAGATCTTAGTGATTCTGTTGTTTGTTATCCTGCCAAAATAGTTTCTCAAATTCACTTACATGGCAAAATTTCTCCTAATCTTGATATGAAATGTTATCAAGTTGGAAGCAATGAAGATTCACCAGGTCCACCATTGTTACCAAATGGTGATGGCAACATCAGACCTTTGAACCATTCAGATACATCAGATACATTGGAGCATGGTGGAATAAGTCTTGATCCTGTTTTGGGGGTCAGTGAAAGTGATAAATTATTACCTCAAAATAGAGTTAATGTGCCCCAGAATGTGGTGGTTATTTGTGAGGATGTGAAGCAAGTAGTTGGTGACAGCAAACAAATTAATGACAGGCATGAAGTTGCTAAAGAAGTAAAGTTTAAAGGACAAGAGGAGGATATGAATTCTGTTTCAATATCAAATGATTATTCAGGTGAAAAGGGTAATTTGGGGATTCTGTCAAGCCCATCTTTGACTGATGGGAGAGTCTGCCTTCCACCAGGTTCACCTCCAAACACAACATCGGTTTGCAATATTTCTACATCAGACAGTAGTAATATCCTTCAAAATGGAAGTTGTAGCCCTGATGTACACCAAAAGAACACTCTATCAGGTCCTACTGATGGATGGAAAGATGGGATTGCAGCAAATGACCGATCAAGATCTGTGGGCAAGTCAACTGAAGCAGGAGATGCTGCTTTGTTGTATTTTGAAGCAATGCTTGGGGCACTGAAAAGGACAAAGGAAAGTATTGGTCGAGCAACACACATAGCTATTGACTGTGCAAAGTTTGGCATTGCAACTAAGGTGGTTGAAATTCTTGTCCGTAATCTGGAAATTGAGACAAGCCTGCATCGGAGGGTGGATCTGTTTTTTCTTGTTGATTCTATTGCTCAATGTTCTCGAGGGTTGAAAGGAGACATTGGCGGACTGTATCCATCTGCTATGAAAGCAGTGCTGCCACGTCTATTGTCTGCAGTTGCACCTCCCGGAAATGCTGCAAAAGAAAATCGTCGTCAGTGTCTTAAGGTATTAAGGCTGTGGTTGGAGAGAAAAATCCTTCCTGAACCCATTATTCGGCATCATATGCGGGAACTAGACTCATATAGCACTTCAGCTTCTGCTGGTGTCTTCTCACGCCGTTCATTAAGAAGAGACAGGCCTTTTGATGACCCTGTCAGAGACATGGAGGGCATGCTTGATGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGAATTTTGCATGCCTCGAATGCTTGAAGATGGAGGAAGTGATTCTGATGGAGGGGAGTTTGAGGCTGTCACACCTGAGCATGATTCTGAAACACATGAAGTGCAAGAAATGGCTCATGCAATTGAAAAACGCAGACATGTGCTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCCTCTGTTGATCTTGAATTAAATTCAATTTGTAATGTTGATAGAGGAAATGCCTCAGAGTTTGAGAAGAATCTTCCTGTGTCCTTTGCTCCTCCTTTACCACAAGATGTGCCACCGTCTTCCCCACCTCCACCTTCATCCCCTCCACCACCACCACCTCCTCCTCCTCCTCCTGTTCCTCTACCTGCACCACCACCTACTTCACACCTCATGTCAGCTACGTCTAAACAATATCATGTTGCAGTTGATTCAAAAGGTTTTGAAGATTCACTGACCTTGAAAGCCAATGTACTGCATCCTATGGCTCAGCCCTTTGCTGAACCAAGAAATAGTCAACCTGTCAGTGAGGCAATTAAGTATACTGTCTATGAATGTAGAGACAAGCCAATGCCGGTGCAGGCGTCTACTTGCTCTTTCAACACCCTTCCTATACAATCAACCGACATTTCCAGGAATACTGATGGTGTTAATATGCATAATAAAGGTTACTCGATACCACCACCGCACCATGTGCCATCCAATCAGTTTTCTTTTGTTCACGGGGAACATCGTATGAAGTCTCGAAAGGAGGTTCTGCCACCTCTTCCATATTCCAATGATCACCACTTTGTGCAGAGCATGAAGAGAGAATTTGGTTATGACAATCATGAGAGATTAAAACCACCTTCATATGATTACCAAGAGATATGGAATGATCCTCCTTCTTATGGTCCTTGGTATCATGACAGAGGTGTGACTGCTCCTTATGGTTGTCATCCAAGTGAACCAGGTAGTTTTCCAGGCCATGGATGGAGATTTCCTCCCCCACCAATGAATTACAGGGACTCCTTGCCTTTTAGACCTCACTATGAAGATGCAATTCCAGTAGCAAATCGAGGCCCAAGCTTTTGGCAGCCCAGGTGA 4140 0.4176 MPPSRRKGGKKAAAAAAACSQFKVGDLVLAKVKGFPVWPATVDEPHKWGYSADRKKVFVYFFGTQQIAFCNPADVEAFTEEKKQSLAKRPGRGADFARAVKEIIESYEKLKSENLDDDDTSFDGEVAIASLSNPTDPSANIWLKDQIEAPLAINSQMKSSNCVSNRPEVVCAAEDAVALRNESYNIEASLDEPTDNAIVAATVKSPFPITLRNEPVRRSRSTLQVQDFVVPCSDGENNGDGKVLDDSIPNRDIRRSKCIRKSPDLLGCDDTNSLAFASNFNMEDNDSEIITINSDDFTLNEGSTIDSNLKSEQSEPIGCPEGEDDLNKGLDVEIKTVISKKKRRPNRKKETNDDGARNASPILLNMCENSKERCPVQDGDEHLPLLKRARVRMNKSSSEAEELNSTVEVQVKSDDEDITDSPHQIITSSNCENGSLAEGGSSVLNEALVNVSPSNLIAPCSENGSHICKTKKDQVIGFSVNDEAALPPSKRIHRALEAMSANAAEEGQACMESSSSVMASTGRCCISTIKKCLCMTVNNEGGNDLELQRLDYCGIDSSHVSVCSFSTHSNTIISIENESSIEVDKHLAKYENEAGKDAIPGDRQQVGEDLSDSVVCYPAKIVSQIHLHGKISPNLDMKCYQVGSNEDSPGPPLLPNGDGNIRPLNHSDTSDTLEHGGISLDPVLGVSESDKLLPQNRVNVPQNVVVICEDVKQVVGDSKQINDRHEVAKEVKFKGQEEDMNSVSISNDYSGEKGNLGILSSPSLTDGRVCLPPGSPPNTTSVCNISTSDSSNILQNGSCSPDVHQKNTLSGPTDGWKDGIAANDRSRSVGKSTEAGDAALLYFEAMLGALKRTKESIGRATHIAIDCAKFGIATKVVEILVRNLEIETSLHRRVDLFFLVDSIAQCSRGLKGDIGGLYPSAMKAVLPRLLSAVAPPGNAAKENRRQCLKVLRLWLERKILPEPIIRHHMRELDSYSTSASAGVFSRRSLRRDRPFDDPVRDMEGMLDEYGSNSSFQLPEFCMPRMLEDGGSDSDGGEFEAVTPEHDSETHEVQEMAHAIEKRRHVLEDVDGELEMEDVAPSVDLELNSICNVDRGNASEFEKNLPVSFAPPLPQDVPPSSPPPPSSPPPPPPPPPPPVPLPAPPPTSHLMSATSKQYHVAVDSKGFEDSLTLKANVLHPMAQPFAEPRNSQPVSEAIKYTVYECRDKPMPVQASTCSFNTLPIQSTDISRNTDGVNMHNKGYSIPPPHHVPSNQFSFVHGEHRMKSRKEVLPPLPYSNDHHFVQSMKREFGYDNHERLKPPSYDYQEIWNDPPSYGPWYHDRGVTAPYGCHPSEPGSFPGHGWRFPPPPMNYRDSLPFRPHYEDAIPVANRGPSFWQPR 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01714 1379 Pfam PWWP domain 25 107 IPR000313 -
Phco2g01714 1379 CDD PWWP_HULK 25 111 - -
Phco2g01714 1379 MobiDBLite consensus disorder prediction 308 359 - -
Phco2g01714 1379 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Phco2g01714 1379 SMART 558neu5 842 973 IPR006569 -
Phco2g01714 1379 MobiDBLite consensus disorder prediction 1104 1152 - -
Phco2g01714 1379 Coils Coil 386 406 - -
Phco2g01714 1379 SUPERFAMILY Tudor/PWWP/MBT 20 115 - -
Phco2g01714 1379 SMART PWWP_4 22 79 IPR000313 -
Phco2g01714 1379 MobiDBLite consensus disorder prediction 1029 1048 - -
Phco2g01714 1379 MobiDBLite consensus disorder prediction 807 828 - -
Phco2g01714 1379 ProSiteProfiles CID domain profile. 835 976 IPR006569 -
Phco2g01714 1379 Gene3D - 841 981 IPR008942 -
Phco2g01714 1379 MobiDBLite consensus disorder prediction 1110 1146 - -
Phco2g01714 1379 Pfam CID domain 843 966 IPR006569 -
Phco2g01714 1379 MobiDBLite consensus disorder prediction 321 339 - -
Phco2g01714 1379 Gene3D - 13 116 - -
Phco2g01714 1379 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1076 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01714 Phco-Chr2 47439146 47455813 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01714 2 47439146 47455813 Phco2g01714 2 47439146 47455813 ECH
Phco2g01714 2 47439146 47455813 Phco6g00915 6 8905973 8920523 PCT