Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01692 ATGGCTATCAAGGAAGATGTGGAGGATGGCAAGCAGAAGGGAATAAGAGAGCCACTTGTGCGGGAACAGAACCACCAGCTTGTCCAACCAACCACAGGGCATCCATGGATGGTTTACTTTAGTACATTTGTTGCAGTGTGGGGATCTTATGAATTCGGGACTTGTGTTGGATATTCATCTCCCACTCAAGATGCTATCAGAAAGGATCTCAGTCTGTCTTTGGCAGAGTACTCCTTGTTTGGCTCCATCTTGTCTTTTGGGGCAATGGTTGGTGCAATAACTTCTGGGCCTATAGCTGATTTTATTGGACGTAAAGGGGCAATGAGAGTGTCAAGTGCTTTCTGTGTTGCAGGGTGGCTTATAATTTACTTTGCGGAGGGCCCTGTGCCTTTGGACATTGCGAGGATAGCAACAGGATATGGAATGGGAGTTTTTTCATATGTGGTTCCTGTCTTTATAGCAGAAATTGCACCAAAAGAACTCCGTGGGACTCTGACTACCTTAAATCAGTTCATGATTGTTTCTGGTGTGTCGGTGTCATTCATAATTGGAAATGTACTTCCATGGAGGACTTTAGCTTTAACCGGAATTATTCCCGCTGCTATATTGCTTTTGGGTCTGTTTTTCATTCCGGAGTCTCCTAGATGGCTGGCAAAGAGAGGACGTCAAAACGATTTTGTTAAAGCACTGCAAATACTTCGTGGAAAAGATACTGATATATCTGAGGAGGCAGAGGAAATTCAGGACTATATAGCTACTTTGGAGAGGCTTCCAAAATCCAGGCTGCTGGAATTGTTTCATAGAAGATATTTGCGCTCAGTAACTATTGGAATAGGCCTTATGTTCTGCCAGCAGCTTGGGGGCATCAATGGTGTTTGCTTTTATGTCAGCAGTATTTTTGAGCAAGCAGGATTTTCTACCACCATTGGGACTATATCATATGCTTGCCTTCAGGTTGTGGTCACAGGTCTTGGAGCAGCCTTCATAGATAAAGCTGGCAGGAAGCCCCTACTTTTATTATCCGGATCAGGATTGGTGGCAGGATGCATATTTGCAGCAGTTGCATTCTACCTCAAGGTTCATGAGGTGGGAGTTGCGGCAGTTCCAGCACTTGCAGTAACAGGCGTACTGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTCGTGATGTCTGAGATATTTCCTGTGAATATTAAAGGGGTTGCAGGAAGTGTGGCCACATTAACGAACTGGTTTGGTGCATGGTTATGCTCCTATACTTTCAACTTCCTCATCAGCTGGAGCTCCTATGGTACCTTCATTCTTTATGCAGCAATTAATGCATTGGCTATATTATTTATAATTGTTTTGGTGCCGGAAACGAAGGGCAAGAGCTTGGAACAATTACAAGCAGCCATTAATTCATAG 1422 0.4395 MAIKEDVEDGKQKGIREPLVREQNHQLVQPTTGHPWMVYFSTFVAVWGSYEFGTCVGYSSPTQDAIRKDLSLSLAEYSLFGSILSFGAMVGAITSGPIADFIGRKGAMRVSSAFCVAGWLIIYFAEGPVPLDIARIATGYGMGVFSYVVPVFIAEIAPKELRGTLTTLNQFMIVSGVSVSFIIGNVLPWRTLALTGIIPAAILLLGLFFIPESPRWLAKRGRQNDFVKALQILRGKDTDISEEAEEIQDYIATLERLPKSRLLELFHRRYLRSVTIGIGLMFCQQLGGINGVCFYVSSIFEQAGFSTTIGTISYACLQVVVTGLGAAFIDKAGRKPLLLLSGSGLVAGCIFAAVAFYLKVHEVGVAAVPALAVTGVLVYIGSFSIGMGAIPWVVMSEIFPVNIKGVAGSVATLTNWFGAWLCSYTFNFLISWSSYGTFILYAAINALAILFIIVLVPETKGKSLEQLQAAINS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01692 473 CDD MFS_GLUT6_8_Class3_like 39 466 IPR044775 GO:0008643|GO:0051119
Phco2g01692 473 Pfam Sugar (and other) transporter 48 469 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phco2g01692 473 FunFam sugar transporter ERD6-like 6 32 471 - -
Phco2g01692 473 ProSitePatterns Sugar transport proteins signature 1. 95 112 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco2g01692 473 PANTHER - 33 468 - -
Phco2g01692 473 Gene3D MFS general substrate transporter like domains 33 473 IPR036259 -
Phco2g01692 473 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco2g01692 473 PRINTS Sugar transporter signature 132 151 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco2g01692 473 PRINTS Sugar transporter signature 373 394 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco2g01692 473 PRINTS Sugar transporter signature 396 408 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco2g01692 473 NCBIfam sugar porter family MFS transporter 36 466 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco2g01692 473 SUPERFAMILY MFS general substrate transporter 28 467 IPR036259 -
Phco2g01692 473 ProSitePatterns Sugar transport proteins signature 1. 325 342 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco2g01692 473 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 460 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01692 Phco-Chr2 47294272 47298425 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01692 2 47294272 47298425 Phco2g01692 2 47294272 47298425 ECH