Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01688 ATGAAGAAAGGAAAGAGTAAGAATGGCGGCTTGTTGCCGAATTCGCTGAGGATTATCTCTCTGTGCCTAAAGACCGTGTCAACAAATGCCACAACCGTTGCTTCTACTGTGCGCTCTGCCGGCGCCTCTGTGGCCGCATCAATTTCCTCCTCTTCTGAGGATCACAAAGATCAGGTAACCTGGGCTGGTTTTGATACACTGGAACTTGATCCATCAAACTTCAAACGCATTCTTTTACTTGGTTATCTGAATGGATTTCAAGTTCTTGATGTGGAAGATGCCTCTGGCTTCAGTGAACTGGTCTCAAAGCGTGATGGCCCAGTTTCCTTTCTACAGATGCAGCCCTTCCCTATCGGTGGTGATGGCCAGGAGGGATTCAGAAAGTCACACCCTTTACTGTTGGTTGTTTCTGGCGATGACAATAGCTATGTTAACCGGAACAGTACTTGTTTGAGTGGTTTAGAGAGGGATGATAATGTTGAGATGAATTCTGGGAACGATTTCAACTCTTCAACAACCGTTCGGTTTTACTCCTTGAAGTCTCACTGTTACGTTCATGTTCTGAAGTTCCGTTCCACTGTGTGTATGATCAGATGCAGTTCACGGATAGTAGCAGTTGGTCTTGCCAAACAAATACACTGCTTTGATGCTGTAACTCTTCAGAATAAGTTCAGTGTTCTCACTTATCCTGTTCCTCAGTTAGCTGGACAAGGAACAACTGGTGTTAATTTTGGTTATGGTCCGATGGCTGTGGGTCCAAGGTGGTTGGCATATGCTTCTAACACCCCTCTTCCCTCTAATTTAGGTTGCTTAAGCCCTCAAAACTGCAGTACTTCATCGGGCATTAGTCCATCAACTACTCCAAGAAATGGTAGTTTAGTGGCTCGTTATGCAGTGGAGTCCAGTAGACATTTGGCTGCTGGAATAATCAAATACTGTCAAGAGCTGCTTCCTGATGGCTCCTCTTCACCCATGTCATCAAATTCAGGTGTAAAAGTCAATAGGGTTACAGGAATTGATGCAGATAATGTGGGCATGGTAGCTGTTAGGGATTTTGTTTCCAAAATTATCATCTCACAATTCAAAGCTCACAGTAGTCCTCTTTCTGCACTATGTTTTGATCCTAGTGGGACCCTTCTGGTCACTGCATCTGTCTATGGGAATAACATTAATATATTTCGTATAATGCCATCATTCACATGCAAGAGTTCAGGAATTCCAGGCTCAAATTGGAACTCTTCTCACGTGCATCTTTATAAACTTCACCGTGGAATAACACCAGCTATGATTCAAGACATCTGTTTCAGTAATTTCAGTCAGTGGATTGCAATTGTCTCCTCCAAGGGTACATGCCATCTTTTCATTTTATCACCTTTTGGGGGTGATACTGGTTTTCGAATTATTAGTTCTCAGGGTGAAGAACCGTCCCTACTTCCAGTTTTTCCTCTACCTTGGTGGTATACACCGGATTCCATTTCTAATCAGCAATCTTTGCCTCCCCCAGCACCTGTTGTCCTTTTTGTGGCTAGTCGGATAAAATATAGTAGTTTTGGATGGCTTAATACTGTTCACAATTCTGCTGCGAATTATACAGGAAAAGTTTTTGTTCCATCCGGTGCTATTGCTGCCATCTTTCATAATTCCTTATCTCACTCGCAGCTTGTTAACTCAAAGGCAAACCCCTTAGAGCACATACTGGTATATACACCTTCAGGTCATGTTGTTCAACATGAACTTCTGCCATCTGTTGGTCCAGAAACAAGTGATACTAGTTTGGGAAACCAGTCGACTTCACTCCTGCATATGCAGGAGGATGAGTTCAGAGTCAAAGTTGAACCTATTCAATGGTGGGATGTCTGTAGAAGGTCAGAATGGCCAGAAAGAGAGGATACTTGCATAAATACCTTTGATAGGCAAGGAGGTATTGATAGAGTTCAAGAGAAAATAGGTTATAGTGACATCTATGGATTGGATTTTTTGGGTATAAGTGATGGGGCAGGGGAAGAGATGGTGAAATCTTCTAGTGAAAATATGCAAGAGAGGTTTCATTGGTATCTGTCTAATGCGGAGGTGCAAGGGAATTTTGGAAGGTTACCCATATGGCAAAAGTCTAAGATTTGTTTCTATTCGATGAGTTCTGTGGGAGCTAGTTTCAGTGCTACTGAGGAGTTTGAGATTGAAAGGGTCCCTGCTAATGAAGTTGAAATAAGGCGGAAGGAGCTGTTGCCTGTTTTCGACCATTTTCATAGTATCAGACCAAGCTTGAGCGAGAGTGGCCTTGCTGGAGAAAGATATTTAAGCCCTTCATCTCCCGTTCCCAATCAAGGTGATTATAAGGAGACTGCTGATGTGACAGTTATTTGTCATTCAAAGCCAGCATCGCTGAGTTCCACTGAAAGCTCTGATGGAGGTTCATCGAGAAGAATTGAGAATCTGCTCGACTTGGATCATGTTGCTTCTAGTTACCAAATACATGGTGAGATATGCCTGGAAAGAATGGGGACAATCAATGTTGAGCCTTCTCTACAAAACCAGATTGTGATGGAAAGTCCATCACGTGTGTTAGGAAACTCAAAAAATGTCGATTTTAATGCTGACCTTATCAGTAGTCCTATATTCCAGATGACAAATGTAACTTCTGATGAAAGAGATTCTATAGGTTTTGGGATCAATGAGAACTCAGCATTGGTCCTAGAACATTTTTCACTCGAGACTGAATTCGTGGATGCAAAGCAAGATGAAGGTGTTGGGATATCTTTAACAGATGGGCACTGCCAAACAGAGGAGCATGATGGAAGTGACCTGTTAACTGAAGTTGTAACTGATGATGTTGACAGCAGCAGTAGCCACCATGAAAAAGAGAAACTGGAGGAGAATGATGAAATGCTTGGTGATATATTTGCTTTTTTCGAAGAAGGTAAAATATAA 2928 0.4235 MKKGKSKNGGLLPNSLRIISLCLKTVSTNATTVASTVRSAGASVAASISSSSEDHKDQVTWAGFDTLELDPSNFKRILLLGYLNGFQVLDVEDASGFSELVSKRDGPVSFLQMQPFPIGGDGQEGFRKSHPLLLVVSGDDNSYVNRNSTCLSGLERDDNVEMNSGNDFNSSTTVRFYSLKSHCYVHVLKFRSTVCMIRCSSRIVAVGLAKQIHCFDAVTLQNKFSVLTYPVPQLAGQGTTGVNFGYGPMAVGPRWLAYASNTPLPSNLGCLSPQNCSTSSGISPSTTPRNGSLVARYAVESSRHLAAGIIKYCQELLPDGSSSPMSSNSGVKVNRVTGIDADNVGMVAVRDFVSKIIISQFKAHSSPLSALCFDPSGTLLVTASVYGNNINIFRIMPSFTCKSSGIPGSNWNSSHVHLYKLHRGITPAMIQDICFSNFSQWIAIVSSKGTCHLFILSPFGGDTGFRIISSQGEEPSLLPVFPLPWWYTPDSISNQQSLPPPAPVVLFVASRIKYSSFGWLNTVHNSAANYTGKVFVPSGAIAAIFHNSLSHSQLVNSKANPLEHILVYTPSGHVVQHELLPSVGPETSDTSLGNQSTSLLHMQEDEFRVKVEPIQWWDVCRRSEWPEREDTCINTFDRQGGIDRVQEKIGYSDIYGLDFLGISDGAGEEMVKSSSENMQERFHWYLSNAEVQGNFGRLPIWQKSKICFYSMSSVGASFSATEEFEIERVPANEVEIRRKELLPVFDHFHSIRPSLSESGLAGERYLSPSSPVPNQGDYKETADVTVICHSKPASLSSTESSDGGSSRRIENLLDLDHVASSYQIHGEICLERMGTINVEPSLQNQIVMESPSRVLGNSKNVDFNADLISSPIFQMTNVTSDERDSIGFGINENSALVLEHFSLETEFVDAKQDEGVGISLTDGHCQTEEHDGSDLLTEVVTDDVDSSSSHHEKEKLEENDEMLGDIFAFFEEGKI 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01688 975 SUPERFAMILY WD40 repeat-like 170 454 IPR036322 GO:0005515
Phco2g01688 975 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 2 959 IPR045142 GO:0006914
Phco2g01688 975 Gene3D - 25 467 IPR015943 GO:0005515
Phco2g01688 975 Pfam Breast carcinoma amplified sequence 3 501 743 IPR022175 -
Phco2g01688 975 SMART WD40_4 181 216 IPR001680 GO:0005515
Phco2g01688 975 SMART WD40_4 354 394 IPR001680 GO:0005515
Phco2g01688 975 SMART WD40_4 412 455 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01688 Phco-Chr2 47238342 47243665 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01688 2 47238342 47243665 Phco2g01688 2 47238342 47243665 ECH