Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01686 ATGAAACAAACGTGGAGATTCTCTTCTGACGCAATGCGAGTTCACTTGTTGCTCTCCCAATACCATTTCCATGGACTCTTCAAGCCCAAAGCCATTCCCTCCTTCTCCACCCCGCTATCTTATCGCAAACTCAACACAATGTCAAACTTGATCTCAGACCTTATTCCACTGTTCATTGCCAAGTCTTCTTCTTCAACCATAAAGGATCACAACGTCATGATTCTTAGGAACGAGCTAGTTCGGGAATCCTCCGACTCTGTTCGGGTTCAAAGCATACTGGACGATAATTATGACCTTCTCAATCGCCGTTACCCCGAGGGATACGTGTTCTTCCAACTTATGAATCAATTGAAGTCAAATCCTTCCCTTGCTCTTCAGGTGTTTAGTTGGAGAAGGAAAAGATGTAATGCTGAAAACCCTATGGATGCAAGAGAGTACTCAAAGGGTATAACAGCTGCAGGTAGAGCTGGGAATATTCATTTAGCTGTTAATCTCTTTAAGGAGGCTGCTAGGAAAGGTCTCAAGACGACCAGCACTTACAATGCGCTAATTGGTGCCTTTTCATTCAATGGTCATGCTGATAACTGTTGGTCCTTGTTTTCTGATCTGAAGAGGGATCCAACTTGCGATCCTTCTATTACCACATATAACATTCTCATATCTAGTTGTGGTAGCTTGATGCTGATTGATCACATGGAAACAATCTTCTCTGAGATACGAAAGTTAGACCTTGCCGTGAACATCAGCACTTATAATCACTTAATTGCTGGATATATCACAGCTTGGATGTGGGATGTTATGGAAAAGGTGTTTCAAATGTTGAAGTCGAGCCCTGTCCAGCCTAACACGAAAACCTACCTGCTAATGCTTCGCGGGTATGCAAATTCAGGTAATCTGGAAAAGATGGAAGAGATGTATTCCATTGTAAGGGATCATGTAAATAAACATGAAATTCGATTAATCAGATCTATGATATGTGCCTATTGTAGAAGTTCTGAAGCGAATAAACTTAAGAGGATAGAATCGCTACTGAAGTTTATTCCAGAAAAGGAGTACAGACCATGGTTAAATGTGTTGCTGATTAAACTCTATGCCAAGGAAAACAGGTTAGAGAAGATGGAGAATGCTATAAATGAGGCATTTGAACATGGAACCTCTATAATAACCAAGGGTATCATGAGATGCATCGCTGCAACTTATTATCGGTGCAATGCAGCGGAAAAGCTAGAAAATTTTGTGAGACGTACTGAAATCTCTGGGTGGAGTACCTGCCGCTCCTTATATCATTGTAAACTGGTCATGCATGGGTCTCAGAAGCGTTTAGATGAATTGTATCGTGTCCTTGAGGAGATGGAAAATGTCAAGCTTGTATGCACAAACAAAACATTATGGATAATGCACAAAGCTTACACCAACAGTGGCCAGAGTTCCATGGTTTTAAAAATACTGGGTCAAATGTTCAAACGTGGTTATGAATTTCCTTTGGATGCATTTCCATCATAA 1503 0.4092 MKQTWRFSSDAMRVHLLLSQYHFHGLFKPKAIPSFSTPLSYRKLNTMSNLISDLIPLFIAKSSSSTIKDHNVMILRNELVRESSDSVRVQSILDDNYDLLNRRYPEGYVFFQLMNQLKSNPSLALQVFSWRRKRCNAENPMDAREYSKGITAAGRAGNIHLAVNLFKEAARKGLKTTSTYNALIGAFSFNGHADNCWSLFSDLKRDPTCDPSITTYNILISSCGSLMLIDHMETIFSEIRKLDLAVNISTYNHLIAGYITAWMWDVMEKVFQMLKSSPVQPNTKTYLLMLRGYANSGNLEKMEEMYSIVRDHVNKHEIRLIRSMICAYCRSSEANKLKRIESLLKFIPEKEYRPWLNVLLIKLYAKENRLEKMENAINEAFEHGTSIITKGIMRCIAATYYRCNAAEKLENFVRRTEISGWSTCRSLYHCKLVMHGSQKRLDELYRVLEEMENVKLVCTNKTLWIMHKAYTNSGQSSMVLKILGQMFKRGYEFPLDAFPS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01686 500 Pfam PPR repeat 465 490 IPR002885 -
Phco2g01686 500 NCBIfam pentatricopeptide repeat 215 247 IPR002885 -
Phco2g01686 500 Coils Coil 363 383 - -
Phco2g01686 500 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Phco2g01686 500 Gene3D Tetratricopeptide repeat domain 72 241 IPR011990 GO:0005515
Phco2g01686 500 Gene3D Tetratricopeptide repeat domain 242 315 IPR011990 GO:0005515
Phco2g01686 500 Pfam PPR repeat family 247 295 IPR002885 -
Phco2g01686 500 Pfam PPR repeat family 176 223 IPR002885 -
Phco2g01686 500 Coils Coil 434 454 - -
Phco2g01686 500 Gene3D Tetratricopeptide repeat domain 316 495 IPR011990 GO:0005515
Phco2g01686 500 PANTHER EXPRESSED PROTEIN 41 499 IPR044179 GO:0003729
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01686 2 47221061 47222879 Phco2g01686 2 47221061 47222879 ECH