Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01598 ATGGTCACTGTGTTTAGACAATGCCTTCTCACGCTGTTGTTCTTCTCCCCAGTTGCATTCTCTGAACTTTGCAATCCACAGGACAAGAAAGTGTTGCTGCAAATAAAAAAGGACTTCAACAACCCTTACCTTCTAGCATCCTGGAACCCAGACACCGATTGCTGCCAATGGTACTGCGTCGAGTGCCACCCTCAAACGCACCGCATCACCTCCCTCGTCATTTTATCCTCTGTTCCCGAAACCAATTTATCGGGGCCAATACCACCTTCCGTCGGTCACCTCCCTTACCTCGAGACCCTCCAATTCCACAAGCTTCCTAAACTCACCGGCCCAATTCAGCCCACCATCGCCAACCTCACTAAACTCAAGGAGCTCTATATCAGCTGGACCAACATCTCCGGCCCAGTAACCCATTTTCTGGCCCAGCTCACCAATCTCCAGTTTCTCGACCTTTCCTTTAATAACCTCTCCGGCCCCATACCAAGCTCACTTTCCCAGTTGCCCAACCTCTTGTCCTTGCGCCTGGACCGGAACAAGCTCACGGGCCCCATCCCAGACTCCTTTGGGTCATTCAAGAGGTCTGGCCCAAGCCTTCTGCTGTCCCACAACCAGCTTTCGGGGCCCATTCCCGCTTCCCTGGCCAACATAGACCCACAACGCATAGACTTTTCAAGGAACAAACTGGAAGGCGACGCTTCCATGCTTTTCGGCAGAAACAAAACGACGCAGATGGTTGACGTTTCCAGGAACCTGTTGGCGTTTGATTTATCCAAAGTGGAGTTTCCCACCAGCTTGATATCGTTGGATTTGAATCACAATAAGATCACTGGAAAGATTCCTGTGGGATTGACCGCAGTAGATTTTTTGCAGGGGTTCAACGTGAGCTATAATCGACTTTGTGGTGAGATTCCGCAGGGAGGACGAATGCAGAAGTTTGATGTCGATTCATACTTTCATAACAAGTGCTTGTGTGGATCGCCCCTTCCCAACTGTAACTGA 999 0.5025 MVTVFRQCLLTLLFFSPVAFSELCNPQDKKVLLQIKKDFNNPYLLASWNPDTDCCQWYCVECHPQTHRITSLVILSSVPETNLSGPIPPSVGHLPYLETLQFHKLPKLTGPIQPTIANLTKLKELYISWTNISGPVTHFLAQLTNLQFLDLSFNNLSGPIPSSLSQLPNLLSLRLDRNKLTGPIPDSFGSFKRSGPSLLLSHNQLSGPIPASLANIDPQRIDFSRNKLEGDASMLFGRNKTTQMVDVSRNLLAFDLSKVEFPTSLISLDLNHNKITGKIPVGLTAVDFLQGFNVSYNRLCGEIPQGGRMQKFDVDSYFHNKCLCGSPLPNCN 332
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01598 332 Pfam Leucine Rich repeat 263 278 IPR001611 GO:0005515
Phco2g01598 332 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Phco2g01598 332 Pfam Leucine Rich Repeat 145 167 IPR001611 GO:0005515
Phco2g01598 332 SUPERFAMILY L domain-like 23 330 - -
Phco2g01598 332 Gene3D Ribonuclease Inhibitor 22 332 IPR032675 -
Phco2g01598 332 PANTHER POLYGALACTURONASE INHIBITOR 1 11 331 - -
Phco2g01598 332 FunFam Polygalacturonase inhibitor 1 22 332 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco2g01598 Phco-Chr2 46281081 46282079 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01598 2 46281081 46282079 Phco2g01598 2 46281081 46282079 ECH