LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco2g01578	ATGAAAGAAATTGAGAAGAGAAAAGCTTCAAGAAATAGTCAGACAAAGGGTCCAAGAAAAACCGAAAGGAGAGAGAATAAATTGCATCAAGATAATTCTTCCAAAACAATGAATGAAAAAGGAATTGAATCTAAGACACTCCATAATAGTAGACCAACTGCAGATAATACTATAAGTGATTCCAACACGGCCTCAGAGAATTCAGAAACTTATGAAAATGTGGATATACATTACCTAGACGATGTCAACAGGTCTGAGGAGGCACTTGCCGAGATGAAAGTTAATGAAATGGTTGCTAATGAAAACAAGAATGAAGTGGCTGATGATCATTCCACTGATTTGGAGAAAGAGCAAAAGGAAGGGAATGAAGAAGTATCAGATGCTGAGACAGTAAAGGATTCAGTATCTTCCCAAGGTGATTCTTTCACAAATGAGGATGAGAGAACAGAAATGGCTTCAAAAGATCCAAAAAGTAAGGTTAGAGTGAATCCTCCAGAAAACAACCATAGTTCAAAGGAGAGATATGATAAAAAAGCAAATAAATTGCAATCAAAGGTATCACATAGCAATCAAAAGAAACCTGTAAACTCAAATCAAGGGCCCTCCAAAGTGGCAAACAAAAGTACTTCTTCCTCAACCAATTCCAAGACTGTGAAAGTTCCTGGAAATGTTTCGTCAGATTCTTCTGAAGGTGTTGATGAAAAACCTGTTCAAGAGATCAAGGAACTTGTTGATATTGTGGATGGACCCCCGAATGGTGTTCAGAGCGTAGGAAGTGAATATGAAAGTCATGAAACAGGAAATGGTGAACATGAGGATGGGGCAGCTGTGGAATTAAAAATTGAAGAAATGGAATTGCGAATTGAAAAGCTCGAAGAGGAACTTAGAGAAGTTGCTGCTCTCGAGGTGTCACTTTATTCTATTGTACCAGAGCATGGAAGCTCAGGACACAAGGTGCACACACCAGCTCGGCGCCTTTCTAGGCTCTATATACATGCTTGTAAGCATTGGACCCAAAAAAGGCGAGCCACAATTGCCAAGAATACTGTTTCTGGCCTCATTTTGGTTGCTAAGTCTTGTGGTAATGATGTTTCAAGATTAACTTTCTGGCTGTCAAATACCGTTGTGCTTAGAGAGATAATTTCACAAACTTTTGGGAATTCATGTCAAGCTAGTCCCCTTAAAAGGTTGGCCGAGTCAAATGGGGCTGGCAAGAGAAATGATGGGAAGTACATTGCACTGCAACGGAAAAGTAGCTCCAATGGTAAACCAGGAAGTGGTTTGATGCCTCTCGTTGAAGATTGGCAAGAGACAGGAACCTTTACCTTTGCCTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGATAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCTTATATGCAGTCTTCAGTTGGGGACTCTTCAAATAAACCTACTGGGAAGTTGATGGGACCTGCTCTGGGTGATCACAATCAAGGAAATTTTTCCATCAATATTTGGAGAAATGCTTTCCAAGATGCCTTTCAACGACTCTGTCCAGTTCGAGCAGGAGGACATGGGTGTGGTTGTTTGCCCGTATTGGCTAGAATGGTAATGGAACAATGCATAGCTAGACTAGATATTGCTATGTTCAATGCTATTCTTCGGGAGTCGGCCCTTGAGATACCAACTGATCCTATATCAGACCCTATTGTGGATTCAAAGGTTTTGCCAATTCCAGCTGGGGATTTAAGTTTTGGGTCTGGTGCACAGCTAAAAAATTCTGTTGGCAATTGGTCTAGATGGCTTACTGACATGTTTGGCATGGATGTGGAAGATTGTCTACAAGAAGATCAGGAGAACAGTGAGAAAGATGAAAAGCAGGGTGGGGATGGTGAACCTAAATCTTTTGTTCTCCTAAACGACTTGAGTGACCTTCTGATGCTACCTAAAGACATGCTTATAGATAGAAAAATCAGACAGGAGGTGTGTCCATCCATCAGTCTTTCATTGGTTATTCGGGTTCTCTGCAACTTCACTCCGGATGAGTTCTGTCCAGACTTTGTTCCAGGAACTGTCTTGGAGGCCCTGAACGCAGAGACTATTATAGAGCGAAGATTGTCATCAGAACCTGTAAGAAGCTTCCCCTATGTGGCAGCTCCTGTTGTGTACATGCCTCCCTCCTCTGCTAATGTGGCAGAGAAAGTTGCAGAGGTTGGAGGAAAGTCCCACTTGGGAAGAAATGTATCAGCTGTTCAGAGGATAGGATACACAAGTGATGAAGAGCTAGATGAACTTGATTCCCCTCTTACATCCATCATTGACAAGCTTCCTTCATCTCCATCAGTCACTCATACTGGAAAAGGTAATCACAAAGAACAAGGGGATCACCCCACCACAAATGCTAGATACCAACTCCTACGTGAAGTTTGGTCCATGTGA	2427	0.4194	MKEIEKRKASRNSQTKGPRKTERRENKLHQDNSSKTMNEKGIESKTLHNSRPTADNTISDSNTASENSETYENVDIHYLDDVNRSEEALAEMKVNEMVANENKNEVADDHSTDLEKEQKEGNEEVSDAETVKDSVSSQGDSFTNEDERTEMASKDPKSKVRVNPPENNHSSKERYDKKANKLQSKVSHSNQKKPVNSNQGPSKVANKSTSSSTNSKTVKVPGNVSSDSSEGVDEKPVQEIKELVDIVDGPPNGVQSVGSEYESHETGNGEHEDGAAVELKIEEMELRIEKLEEELREVAALEVSLYSIVPEHGSSGHKVHTPARRLSRLYIHACKHWTQKRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTVVLREIISQTFGNSCQASPLKRLAESNGAGKRNDGKYIALQRKSSSNGKPGSGLMPLVEDWQETGTFTFALERVESWIFSRIVESVWWQALTPYMQSSVGDSSNKPTGKLMGPALGDHNQGNFSINIWRNAFQDAFQRLCPVRAGGHGCGCLPVLARMVMEQCIARLDIAMFNAILRESALEIPTDPISDPIVDSKVLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDVEDCLQEDQENSEKDEKQGGDGEPKSFVLLNDLSDLLMLPKDMLIDRKIRQEVCPSISLSLVIRVLCNFTPDEFCPDFVPGTVLEALNAETIIERRLSSEPVRSFPYVAAPVVYMPPSSANVAEKVAEVGGKSHLGRNVSAVQRIGYTSDEELDELDSPLTSIIDKLPSSPSVTHTGKGNHKEQGDHPTTNARYQLLREVWSM	808

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco2g01578	808	PANTHER	NUCLEAR PORE COMPLEX PROTEIN NUP205	276	806	IPR021827	GO:0005643
	Phco2g01578	808	MobiDBLite	consensus disorder prediction	1	74	-	-
	Phco2g01578	808	MobiDBLite	consensus disorder prediction	47	72	-	-
	Phco2g01578	808	MobiDBLite	consensus disorder prediction	96	235	-	-
	Phco2g01578	808	MobiDBLite	consensus disorder prediction	184	231	-	-
	Phco2g01578	808	Coils	Coil	100	120	-	-
	Phco2g01578	808	Coils	Coil	274	301	-	-
	Phco2g01578	808	MobiDBLite	consensus disorder prediction	1	46	-	-
	Phco2g01578	808	MobiDBLite	consensus disorder prediction	247	272	-	-
	Phco2g01578	808	Coils	Coil	172	192	-	-
	Phco2g01578	808	MobiDBLite	consensus disorder prediction	102	130	-	-
	Phco2g01578	808	MobiDBLite	consensus disorder prediction	143	183	-	-
	Phco2g01578	808	MobiDBLite	consensus disorder prediction	770	795	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco2g01578	Phco-Chr2	46088374	46092392	Dispersed/Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco2g01578	2	46088374	46092392	Phco2g01578	2	46088374	46092392	ECH