Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01564 ATGGCAACGGCGGGGAGTAAGAAGCCTCTCTCTTTGCAGCAATTCATCTCTGTTACCGCTCCTCTTCTTGATTTGGAAAAGGATGCTGAGATTTCAAGCTCTATTGCTACCGGCGCGTCCCGGAATTTGGACACTGCTCAAAAGAGAGGTTCCACAATCCTCAACTTGAAGTGCATCGATGTCCAGACAGGGCTTATGGGGAAGTCTCTGATCGAGTTCCAGTCTACCAAAGGAGATGTTCTCCCTGCACATAAGTTTGGTACTCATGATGTTGTTGTTTTAAAACTCAACAAGGCAGATTTAGGTTCTCCTGCTCTTGGACAAGGTGTTGTTTACAGATTAAAGGACTCGTCAATAACTGTTGCTTTTGATGATATACCCGAAGACGGTTTGAACAGTCCTCTAAGGCTGGAAAAAGTAGCAAATGAGGTGACGTATCGCAGGATGAAAGACGCATTGATACAGTTGAGTAAAGGAGTGCACAGGGGTCCTGCCTCTGATCTGATTCCTGTCTTGTTTGGGGAGAGGCCACCAACAGTGTCCAAGAAGGACATATCCTTCACTCCCTATAATAGAAATCTTGATCAGTCTCAGAAAGAAGCAGTTTCGAAAGCTCTATCATCAAAGAATGTGTTCTTGCTGCATGGACCACCTGGAACGGGAAAAACTACAACAGTTGTAGAAATTATATTACAAGAAGTAAAACGTGGATCTAAGATTCTTGCTTGTGCAGCCTCAAATATTGCTGTTGACAACATTGTAGAGCGGCTAGTTCCACATAGAGTTAAGCTGGTGAGACTGGGTCATCCTGCACGTTTATTGCCTCAAGTACTGGACAGTGCGCTGGATGCTCAGGTACTACGAGGAGATAATAGTGGTCTTGCAAATGATATTCGTAAAGAAATGAAGGCATTGAATGGAAAGCTCCTGAAAACTAAAGACAGAAATACAAGAAAGGACATACAAAAGGAACTTAGGACTCTATCCAAAGAAGAACGTAAAAGGCAGCAGCTTGCTGTAACAGATGTACTTAAAAGTGCAGATGTAATATTAACTACTTTGATTGGGGCTTTCTCTAAGAAACTAGACAGCACTTCATTTGATTTGGTGATTATTGATGAAGCTGCTCAAGCACTTGAGATAGCATGCTGGATACCTCTGCTGAAGGGTTCAAGATGTATACTTTCAGGGGACCATCTTCAACTTCCTCCAACCATTCAAAGTGTTGAAGCTGAGAAGAAAGGCTTAGGAAGAACACTCTTTGAACGACTTGCAGAAACGTATGGGGATGAAATCACATCAATGCTTACTGTGCAGTACCGTATGCATGAACTTATCATGGATTGGTCTTCTAAAGAGCTTTACAACAGTAAGATCAAGGCTCATCCAAGTGTTACTGCACATATGTTGTATGATCTTGAGGGTGTGAAGCGGACATCTTCAACTGAACCTACCCTTCTTCTTGTAGACACAGCTGGATGTGATATGGAAGAAAAGAAAGATGAAGAAGATAGCACCTTTAATGAAGGTGAAGCCAAAGTTACTGTGGCTCATGCAAAGAGACTAGTGCAAAGTGGGGTGCTTCCTTCTGATATAGGAATAATTACCCCATATGCTGCCCAGGTTGTTTTACTCAAGATGTTGAAAAACAAGGAGGACCGGTTGAAGGATGTTGAAATCTCAACAGTTGATGGTTTCCAAGGAAGGGAGAAGGAAGCCATTATTATATCAATGGTTCGATCAAATTCAAAAAAAGAGGTTGGCTTTCTAAGTGATCGCCGGCGAATGAATGTAGCTGTGACACGGTCTAGAAGGCAATGCTGTCTTGTCTGTGACACAGAGACAGTAAGTGGTGAAGGATTTCTAAAGCGATTGATTGAGTATTTTGAGGAGCATGGTGAATATCTGAGTGCATCTGAGTACCAGAATGAGTAG 1935 0.4248 MATAGSKKPLSLQQFISVTAPLLDLEKDAEISSSIATGASRNLDTAQKRGSTILNLKCIDVQTGLMGKSLIEFQSTKGDVLPAHKFGTHDVVVLKLNKADLGSPALGQGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALIQLSKGVHRGPASDLIPVLFGERPPTVSKKDISFTPYNRNLDQSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKALNGKLLKTKDRNTRKDIQKELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFSKKLDSTSFDLVIIDEAAQALEIACWIPLLKGSRCILSGDHLQLPPTIQSVEAEKKGLGRTLFERLAETYGDEITSMLTVQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTSSTEPTLLLVDTAGCDMEEKKDEEDSTFNEGEAKVTVAHAKRLVQSGVLPSDIGIITPYAAQVVLLKMLKNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRSRRQCCLVCDTETVSGEGFLKRLIEYFEEHGEYLSASEYQNE 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01564 644 CDD DEXXQc_SMUBP2 193 441 - -
Phco2g01564 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 627 IPR027417 -
Phco2g01564 644 Coils Coil 295 315 - -
Phco2g01564 644 SMART AAA_5 208 460 IPR003593 GO:0016887
Phco2g01564 644 CDD SF1_C_Upf1 442 630 IPR047187 -
Phco2g01564 644 FunFam DNA-binding protein SMUBP-2 38 140 - -
Phco2g01564 644 Pfam AAA domain 194 408 IPR041677 GO:0004386
Phco2g01564 644 Pfam AAA domain 417 613 IPR041679 -
Phco2g01564 644 FunFam P-loop containing nucleoside triphosphate hydrolase 440 644 - -
Phco2g01564 644 NCBIfam IGHMBP2 family helicase 341 637 IPR004483 GO:0003677|GO:0005524
Phco2g01564 644 Gene3D - 20 424 IPR027417 -
Phco2g01564 644 Gene3D - 440 644 IPR027417 -
Phco2g01564 644 SMART ultradead3 190 441 IPR014001 -
Phco2g01564 644 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 34 643 - -
Phco2g01564 644 Gene3D - 38 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01564 Phco-Chr2 45850763 45858010 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01564 2 45850763 45858010 Phco2g01564 2 45850763 45858010 ECH