Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01488 ATGGTGGCTGGCGATTCGCGCAGGCGTGATCGTCGCGAGGCTAGCAGTTTGCGTAGAGGGAGTGCGGCGAAGGTGATTGCTCTGTGGTGGATGGCGTCTTGCAGCAACGGTGGCGCGGAGGTGAGCGCGCGTCATGCACAGTGGTGCGTGCGTGGTGCTGGTACAGCTGTGTGCGGCTTGGTAGCTGCGGTCCAGTGCGGCGAAGCACCAGTACAGTGGGGAGTGCGACCGGGTCTCTTGCAACTAGTTTTGGACCTTAAATTGCCATTCCCTCTTCTATTCTATTCCTTCTTCCTAAGTATTTTTCTCATCAAAATGCCTCCATTTCACTCCTCCATCACTTATATACTCCTCCTATTTATGCTTCTAATCACTCATTCTGCCACAACAGAAGCACAATCTGGAGTATGTTATGGAAGACTTGGAAACGACTTGCCATCTTCCACAGAAGTTGTGGCACTCTACAATCAATACAACATTCGCAGGATGAGAATTTATGATCCAAATCCAGAAGTTCTTCAAGCTTTGAGAGGCTCCACTATTCAGCTGCTGTTAGACATTCCAAATAAAGACCTCGGAAATCTAGCAGCTAGCCAAGTGAATGCAAACAAATGGGTGCAAGACAACATAAAAAACTATGCCAATGTCAGATTCAGATACATTGCTGTGGGAAATGAAGTAAAGCCTGAAGATTCAGCTGCACAGTTTGTAGTGCCTGCAATGCAAAACATTCAAAATGCCATTTCTGCAGCAGGCCTTGGAAACCAAATAAAAGTTTCCACTGCCATTGAAACTGGTGCCTTGGCAGAATCATACCCTCCATCAAAAGGCTCCTTCAAGTCTAACTATAGAGGAGCATATCTTGATGGTGTCATAAGATTTCTGGTGAACAATAACTCCCCATTATTGGTTAATGTTTACACTTACTTCGCTTACGCCAACTCTAGGGACATTAGTCTTGATTATGCTCTTTTCACGTCTCCTTCGGTGGTGGTGAATGATGGTTCACATGGTTATAGAAACCTTTTTGATGCTATGGTGGATGCTGTTTATTCTGCATTGGAGAAAGTAGGGGGAGGGTCACTGAACATAGTTGTGTCTGAGAGTGGATGGCCTTCTTCTGGTGGGACTGGAACTACCCTTGACAATGCAAGAACTCACAACACAAACTTGGTTCAACATGTCAAAAATGGAACTCCAAAAAGACCTGGTAAACCTATTGAAACATATTTGTTTGCCATGTTTGATGAGAATCTGAAGCATCCAGAGCATGAGAAATTTTGGGGGCTCTTCCGTCCAGATAAACAGCCCAAATACTCTATTAACTTGAATTAG 1335 0.4494 MVAGDSRRRDRREASSLRRGSAAKVIALWWMASCSNGGAEVSARHAQWCVRGAGTAVCGLVAAVQCGEAPVQWGVRPGLLQLVLDLKLPFPLLFYSFFLSIFLIKMPPFHSSITYILLLFMLLITHSATTEAQSGVCYGRLGNDLPSSTEVVALYNQYNIRRMRIYDPNPEVLQALRGSTIQLLLDIPNKDLGNLAASQVNANKWVQDNIKNYANVRFRYIAVGNEVKPEDSAAQFVVPAMQNIQNAISAAGLGNQIKVSTAIETGALAESYPPSKGSFKSNYRGAYLDGVIRFLVNNNSPLLVNVYTYFAYANSRDISLDYALFTSPSVVVNDGSHGYRNLFDAMVDAVYSALEKVGGGSLNIVVSESGWPSSGGTGTTLDNARTHNTNLVQHVKNGTPKRPGKPIETYLFAMFDENLKHPEHEKFWGLFRPDKQPKYSINLN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01488 444 ProSitePatterns Glycosyl hydrolases family 17 signature. 362 375 IPR000490 GO:0004553|GO:0005975
Phco2g01488 444 FunFam glucan endo-1,3-beta-glucosidase, basic 134 443 - -
Phco2g01488 444 Pfam Glycosyl hydrolases family 17 135 442 IPR000490 GO:0004553|GO:0005975
Phco2g01488 444 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 121 442 IPR044965 GO:0004553|GO:0005975
Phco2g01488 444 Gene3D Glycosidases 134 444 - -
Phco2g01488 444 SUPERFAMILY (Trans)glycosidases 135 442 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01488 Phco-Chr2 44641504 44648532 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01488 2 44641504 44648532 Phco2g01488 2 44641504 44648532 ECH