Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01470 ATGACCCTGTCGTACAGATTCTGCAGAATGAAGGTTGAAATTGAAGGCAGCCAGAGTGACTGTGCTGAATCTCAGGGAGTGTCTGGAACAGATGAATCTGTTTCCAGCCAACCAGAAAATAGAAGATTGGAATCCAAGAAGAAACTGAAAAAAGTGAGGTCAATAAGAAGACTTGTAAGATTGCCAAGCAAGAGATCATCCACTATAGGGAGACCCCAATATGATCATCTCTCCATTCTCTCATCAGTTAGCACAGATAATTTGGAGGGGGTAACACCACTTGATATGGTAGATGCATCACCCCATTACATGAAGGGTACCAGCAGTTCTCATGCAAAGGATAGTGTTCAGAATACACAAAGACTATTGTTCAGTAAGAAGACTTTGGGAAGAATGTCTACTTTGAAACTGAAGAGGAGTCTGACCAGAAAGGTATCTGGACGGACTGAACCAAAGAGGAAACTGAAGTCTTCTAGATCAATCATGTTTGTAACTGTCAAGGGCCAAAAGTCAACAAGAAAGTCATCTGAATCTAGTTATGGCAGTGATGACCAGAATTGGAGAAGTGCAAGTGATCTTGATAACAAAACCCAGAGAGTCATTACCAGAAGATTAAGCTTGAAGCCAGTGAGGATCTTAGCAAAGATTCCCACTTTCAAATCAAAGAATTCTCAATCCCCAGACACAAGCTTGGTTAGAGCCACTTGCTCTTCTGCTCTGAAGGATTCCCATTTTCCTGACCACATTGACATCCCTCAAGAGGAAAGTGATTCTCAAGGAGTATCAGCTGTTGTGAAGGTTTGTCCATATTCTTACTGCTCACTTCATGGTCACCGCCATGGGAATCTGCCTCCACTGAAGCGCTTTGTGTCAATGAGGAGGCGCACGTCCAAGAGCCAAAAGCCAACAAAAATGGATCATCAACCTGTTACTAGATCAAATCAGTTTGGTAATGCAAAGAAAGCCACTCAGAAAACTCAAACTGTCCACAGTGAAGGTGGCAAATCTCATTTTCAAAACAAGAAAAAGCTGGCAAGGGACTCATGTATTAGGCCTCATGACACTCCAGAATCCACAGTTACTGAAAGTGTGGAATCAGCATCAACAGATGGAGTCGAGTTTTCTGCTCCTGGTATTGAGATATCGGAGGGAGAAGTAAGCAACACAGGAAAAAATATGGAGCCAGATCATGAAGTACTGGAGGTGAGTGCTAGTACTACTGATATGGCATGTGGAATGCAGGAAAGAGATAGAAAGTCTATCAACATGTGGCAGTTAGTGTACAAGCATGCTGTATTAAGTGACACAGGGAAATGTGAAGACAAACAGTCCTTTGATGGGAGGGACAAGGAAGGAAAAGAGCAAGATTTCCTTGCAACTAATGAAGTAAACAACTCTAATTGTCGCAAGGATTGTGATACAGATCAGGATATGGATGATGAAAATAAGAATGTAATTGAGCTGGTGCAGAAAGCGTTTGATGAAATTCTTCTCCCAGAACCTGAAGACCTCTTTTCTGATGACAATTCCAAATCTGAAGGCGTTGATTCAGACGAGGTACTCTCAGAAAAAAGTGCAGGCCAGAAAGAATGGAAAACCTCAGAATCGACAGACTCTCCAATAGCACAGAGGATGGGGACCAAATCTGACCAAAGAGTACCGAAAAGCTGGAGCAATCTGAAAAAGTTAATTCTCTGGAAGAGGTTCGTAAAAGCATTAGAGAAGGTAAGAAATATCCACCCTCAACGACCAAGACATTTTCCTTCTGATGCTAACTTTGAAATGGAAAAAGTTTTTCTCAAGCACCAAACAGCAGAAGAGAAAAAACATGCTGAGGAATGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTTGCACCTGCTCAAAGACGAAGAGTGACACTTTTAGTAGAAGCTTTTGAAACAGTTCAGCCATTTCAAGATGTTGAAAATGGTACACGGTTTTCTGCAACAACGGAGCCTCAATCAAATCCAATTCAATCCCCTGACAGTTCCTCAAATCATAGCAATGAAGAAGCGTCACTTTCTCATAACAGTACCATGGAACTGGCTGTTACTACTGGTGATGATCCAAAGATAGAAATGCATAATCCTACTATGCTCAAAGAAAGATATCTTGACTATCCTGAGACCGAGACTGTTAGTAATATACCTGCATTTGGAGATATTGGAGAAGACTTAAATGGAAAGCAATGCTTAGCCAGCAGTTATGATAATGAGAAGAAGTTATCAAGTGACAATGATAATATTATTCTTGGAGAGATCAAAGATACCAGATCAAGTTCCTTAAATAAGCCAACTGAATTTACAAGCAGTCATTTGGAGGATTCAACCAATGCAGTAATCAATGATGTTTCAGAAGACTTGCTATCCAGTTTGAATTCAGAAAATCAACATATCAAATCTGACTCACCTGGAAGAGATGTTGAAACCAAGAATCTGATTGGCGATAATGGGGAAAAGCTTTCCATGTCTAAAAGTTTAATCGTAGAAGGTCTAGTTAGATCACTCAGATCTAACTTGATTGGTTCAGGAGCACCTGCAAATCTATTAGATGAATCATCAGCTGACGGAAAAGAAGGAACTGAAAAAGCTAAGTTGGATACCGAGAACGTTGAAGAGTTCCCTACAAAGGAACAATCTAAGGCTCCTACGAGTGCTGCTGTAGAACCTGAGACCCCTGTGGAGAAACAGAACAACACAGGATTGTGGTACTTGGTGTATAAACACATGGTATCAAATATGGATGAAGGCAATCCCAAGTCAGTGATTGATGGTGAGGATGAGAAAGAGTCAGCGTTTGATGGAAGCAGAACACGAGGATCTTCCATCTCTCACGAAGGTACACCTTTGAGTGATCAAAAGATGCAATTCAAGGACCATGATGTATCTGATCCAGAAGTTGCACTCCAACAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATTCTTCCAGATGATGAGGATGACTTAGCAGACAAGGAGTCACTCACTGGCAACCAAATATCAGACAACTCCAAACAATCTGACAGAACTGAAAGGGTGTACAGTGAAGGCCTGAAACAAAAAGAAGAAAAGATGGAATCTGGGAATGAAATAACCCAGGAACAGCAAGAAGAATCAACACCAAAGGAACAAAGCAAAACAAACCAGCCATTGTCTAGAAGCTGGAGCAATCTTAAAAAAGTGATCCTTATTAAGAGATTCATCAAGTCATTGGAAAAAGTAAGTAAATTCAATCCAAGAGGGCCCAGACATCTACCTCTAGAGGCTGATTCAGAAGCTGAAAAAGTTAACTTAAGGCATCAAGACATGGAAGAAAGAAAAGGAACTGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAAGCCCGGCTAGGAAAAGAAAAGTGGGGCTGCTAGTGGAAGCTTTTGAAACAGTCATGCCAACCATCAAAAATTGA 3492 0.4086 MTLSYRFCRMKVEIEGSQSDCAESQGVSGTDESVSSQPENRRLESKKKLKKVRSIRRLVRLPSKRSSTIGRPQYDHLSILSSVSTDNLEGVTPLDMVDASPHYMKGTSSSHAKDSVQNTQRLLFSKKTLGRMSTLKLKRSLTRKVSGRTEPKRKLKSSRSIMFVTVKGQKSTRKSSESSYGSDDQNWRSASDLDNKTQRVITRRLSLKPVRILAKIPTFKSKNSQSPDTSLVRATCSSALKDSHFPDHIDIPQEESDSQGVSAVVKVCPYSYCSLHGHRHGNLPPLKRFVSMRRRTSKSQKPTKMDHQPVTRSNQFGNAKKATQKTQTVHSEGGKSHFQNKKKLARDSCIRPHDTPESTVTESVESASTDGVEFSAPGIEISEGEVSNTGKNMEPDHEVLEVSASTTDMACGMQERDRKSINMWQLVYKHAVLSDTGKCEDKQSFDGRDKEGKEQDFLATNEVNNSNCRKDCDTDQDMDDENKNVIELVQKAFDEILLPEPEDLFSDDNSKSEGVDSDEVLSEKSAGQKEWKTSESTDSPIAQRMGTKSDQRVPKSWSNLKKLILWKRFVKALEKVRNIHPQRPRHFPSDANFEMEKVFLKHQTAEEKKHAEEWMLDYALQKVISKLAPAQRRRVTLLVEAFETVQPFQDVENGTRFSATTEPQSNPIQSPDSSSNHSNEEASLSHNSTMELAVTTGDDPKIEMHNPTMLKERYLDYPETETVSNIPAFGDIGEDLNGKQCLASSYDNEKKLSSDNDNIILGEIKDTRSSSLNKPTEFTSSHLEDSTNAVINDVSEDLLSSLNSENQHIKSDSPGRDVETKNLIGDNGEKLSMSKSLIVEGLVRSLRSNLIGSGAPANLLDESSADGKEGTEKAKLDTENVEEFPTKEQSKAPTSAAVEPETPVEKQNNTGLWYLVYKHMVSNMDEGNPKSVIDGEDEKESAFDGSRTRGSSISHEGTPLSDQKMQFKDHDVSDPEVALQQIEAIKMVEEAIDSILPDDEDDLADKESLTGNQISDNSKQSDRTERVYSEGLKQKEEKMESGNEITQEQQEESTPKEQSKTNQPLSRSWSNLKKVILIKRFIKSLEKVSKFNPRGPRHLPLEADSEAEKVNLRHQDMEERKGTEEWMLDYALRQVVSKLSPARKRKVGLLVEAFETVMPTIKN 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01470 1163 Pfam Plant calmodulin-binding domain 1054 1159 IPR012417 GO:0005516
Phco2g01470 1163 Pfam Plant calmodulin-binding domain 544 646 IPR012417 GO:0005516
Phco2g01470 1163 MobiDBLite consensus disorder prediction 653 687 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 532 553 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 438 476 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 865 886 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 996 1066 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 887 905 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 17 49 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 853 905 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 1019 1055 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 354 370 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 438 457 - -
Phco2g01470 1163 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 343 647 IPR044681 GO:0005516
Phco2g01470 1163 MobiDBLite consensus disorder prediction 500 553 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 926 975 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 504 531 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 317 334 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 335 353 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 946 961 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 166 191 - -
Phco2g01470 1163 Coils Coil 1032 1052 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 18 36 - -
Phco2g01470 1163 MobiDBLite consensus disorder prediction 317 370 - -
Phco2g01470 1163 SMART CaM_binding_2 533 647 IPR012417 GO:0005516
Phco2g01470 1163 SMART CaM_binding_2 1045 1159 IPR012417 GO:0005516
Phco2g01470 1163 MobiDBLite consensus disorder prediction 930 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01470 Phco-Chr2 44381025 44386335 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01470 2 44381025 44386335 Phco2g01470 2 44381025 44386335 ECH