Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01464 ATGGGAAGTGGGTCCCACCGCACGTCCTTCGTTGATTTTTATGAGGTCGCGGTTGCGCAAGACAGAATTCACCTCACCGCTGAGAAAAGAACGAACAAACAAACGCGCGTCTCGGTTTCCAATGTGAAGCGAGCGATACCAAAAAACATGGCTCTAATCGCTGTTAGGATTCTCGGTTCCAATTCGCGAACCGCGCTCCGCCGCTGGTGTCGCTTCTCCTACTCCTCCGCCTCCGCAGCGGTGGCGGAAGTGGAGAGCACGGAGGTGAAGGACTACGCCGACTACCGGCGCTCCCTATACGGACAGATCACGCACAAGGCGCTCCTCGTAGACGCCGTTGGCACGCTCGTCCTCCCCTCGCAACCTATGGCTCAGATATATAGGACGATCGGTGAAAAGTATGGTGTGGAGTACTCGGAGGATGAAATACTGTTCAGATACAGAAGAGCGTATGGGCAGCCATGGGGTAAATCTCGTCTCAGATATGTTAATGATGGTAAACCCTTCTGGCAATACATAGTTAGTTATTCCACCGGCTGTTCAGATCCTCAATACTTTGAAGAACTTTATAACTATTATATGACAGACAAGGCATGGCACCTCAATGATCCTGAAGCAGGAGAAGTATTTAGAGCTCTTAGGAAATCAGGTGTGAAATTAGCTGTTGTATCAAATTTTGACACTAGGTTAAGACCTCTTCTGCGGGCATTAAATTGTGACACTTGGTTTGATGCGGTAGCAGTCTCAGCTGAGGTTGCGGCCGAGAAACCAAATCCAACTATATTTCTTAAAGCATGTGAACTATTGGATGTAAAACCTGAGGATGCTGTTCATGTTGGGGATGATCGCAGAAATGATATTTGGGGTGCCAGGGATGCAGGTTGTGATGGTTGGCTTTGGGGAAGCGATGTTCACACTTTTAAGGAGGTAGCACAGAGGATTGGGGTTCAGGTCTGA 957 0.488 MGSGSHRTSFVDFYEVAVAQDRIHLTAEKRTNKQTRVSVSNVKRAIPKNMALIAVRILGSNSRTALRRWCRFSYSSASAAVAEVESTEVKDYADYRRSLYGQITHKALLVDAVGTLVLPSQPMAQIYRTIGEKYGVEYSEDEILFRYRRAYGQPWGKSRLRYVNDGKPFWQYIVSYSTGCSDPQYFEELYNYYMTDKAWHLNDPEAGEVFRALRKSGVKLAVVSNFDTRLRPLLRALNCDTWFDAVAVSAEVAAEKPNPTIFLKACELLDVKPEDAVHVGDDRRNDIWGARDAGCDGWLWGSDVHTFKEVAQRIGVQV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01464 318 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 213 226 IPR006439 -
Phco2g01464 318 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 105 116 IPR006439 -
Phco2g01464 318 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 243 259 IPR006439 -
Phco2g01464 318 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 261 281 IPR006439 -
Phco2g01464 318 Pfam Haloacid dehalogenase-like hydrolase 114 296 IPR041492 -
Phco2g01464 318 SUPERFAMILY HAD-like 106 309 IPR036412 -
Phco2g01464 318 NCBIfam HAD hydrolase, REG-2-like, family IA 106 299 IPR011949 -
Phco2g01464 318 NCBIfam HAD-IA family hydrolase 214 294 IPR006439 -
Phco2g01464 318 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 106 300 - -
Phco2g01464 318 CDD HAD_dREG-2_like 206 317 - -
Phco2g01464 318 SFLD Haloacid Dehalogenase 106 300 - -
Phco2g01464 318 Gene3D - 121 194 IPR044924 -
Phco2g01464 318 PANTHER - 63 317 - -
Phco2g01464 318 Gene3D - 109 300 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01464 Phco-Chr2 44178045 44183004 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01464 2 44178045 44183004 Phco2g01464 2 44178045 44183004 ECH