Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01460 ATGAACCCAGGGCTTGTTGCAGTTGCAACCTTGCTTGCACTCTTCGCCATCACCTTCTCCTTCTTTAACCCTCAAGCCCTGTTTTCTCCACCCCATGTTCCGGGATCCAAGGATCACCTCCACGCAGCGCAGATAATCCACCTTGCCGGCGCCGTCGGGCCTGAGAGTCTGGTTTTTGACGCTCACGGTGGAGGGCCCTACACCGGCGTCGCTGACGGCCGGATTTTGAAGTGGGAAGGCGAGCAGCAAGGGTGGACAGAGTTTGCTTTCACCAGTTCCAATAGGTCAGATTGTAGGAGTCCATTTGCACCAGAGTTGGAGCATGTTTGTGGGAGGCCTTTAGGACTAAAATTTGATAAGCAAAGTGGAGATCTGTACATTGCTGATGCCTATCTAGGCCTAAAGGTAGTGGGTTCTGCAGGGGGTTTGGCCACAAACGTGGTGACAGAAGTTGAAGGCCAGCCCTTGCGCTTCACTAATGACATGGACATCAGTGAAGAGGAAGATGTCATTTACTTCACTGAATCAAGCACAATCTTCCAGAGAAGGCAATTTATGGTTGTACTCCTTAGTGGAGATAGGACTGGTAGGTTAATGAAATATGACAGGTCAACAAAAGAAGTGAAGGTCTTATTACGTGACCTTGCTTTTCCTAATGGTGTTGCTTTAAGCAAAGATGGATCATTTGTTCTGGTAGCAGAAACCAGTACTTGCAAGATCCTGCAACTTTGGCTTGGTGGACCCAAGGCTGGTCAAGTGGATACTTTTGCCGAATTACCTGGTTTTCCAGACAATATAAGAAGAAATTCAGAAGGGCATTTTTGGGTAGCTCTGCATGCAAAGGGAAGCCCTTTTGGGAAGTGGGTTTCTTCCACTCCATGGGCAGGAAAGGTAATGATAAAGATTGGATTTAACTTCAAACAGTTGCACTCATCATTTGCAGGCTGGAAGCCTCATGCTGCTGCTATAAAGCTAAGTGAGAGAGGAGAGATACTAGAAGTCTTGGAAGATAGTGAGGGGAAGACCTTAAAGTTCATCAGTGAAGTGGAAGAGAAAGATGGGAAGCTTTGGATTGCATCTGTGTTGATGCCTTTCATTGGCATTTATGGTTTGTGA 1116 0.4695 MNPGLVAVATLLALFAITFSFFNPQALFSPPHVPGSKDHLHAAQIIHLAGAVGPESLVFDAHGGGPYTGVADGRILKWEGEQQGWTEFAFTSSNRSDCRSPFAPELEHVCGRPLGLKFDKQSGDLYIADAYLGLKVVGSAGGLATNVVTEVEGQPLRFTNDMDISEEEDVIYFTESSTIFQRRQFMVVLLSGDRTGRLMKYDRSTKEVKVLLRDLAFPNGVALSKDGSFVLVAETSTCKILQLWLGGPKAGQVDTFAELPGFPDNIRRNSEGHFWVALHAKGSPFGKWVSSTPWAGKVMIKIGFNFKQLHSSFAGWKPHAAAIKLSERGEILEVLEDSEGKTLKFISEVEEKDGKLWIASVLMPFIGIYGL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01460 371 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 38 371 - -
Phco2g01460 371 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Phco2g01460 371 PANTHER STRICTOSIDINE SYNTHASE-RELATED 12 364 - -
Phco2g01460 371 Gene3D - 37 370 IPR011042 -
Phco2g01460 371 SUPERFAMILY Calcium-dependent phosphotriesterase 26 366 - -
Phco2g01460 371 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01460 Phco-Chr2 44149328 44151732 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01460 2 44149328 44151732 Phco2g01460 2 44149328 44151732 ECH