Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01452 ATGTGGGTGTTCCTTAGGATAGGTCAGAGAGGGAGAGAAATGGCTGGTGAGAATGGGTTCCAGTGGGAGAGAGTGGGAGGAGAAGAAGCAGAACAAGAAGGAGCAGAACAAGAAGGAGCAGAACAAGAAGGAGCAGAACAAGTCAAAGGGTGCTTGAGCAAGTTCATCGATGATGGCACCGTTGAAAGTCACAGATACTACTTGTCTCGCAGAACCACTCTGGAAATGCTCAAAGACAGAGGCTACTCCATTCCCTCCAACGAAATCGACCTTTCTCTCTCCCAATTCCGCCACATGCACGGCCATTCCCCCGACCCTGACCGTCTCCGCCTCTCCCTCGCTCACGCCACCAATCCTTCCAAAAGGATTTTAGTCATTTTCTGTGGGCCAGGTGTTGTGAAAGTTACTGCCATTCGGAACATTGCGGGGCAGATTGTTAATAGAGATACTTTGAGTGGTCTTATATTGATAGTGGAGAATCATGTTACGAGCCAGGCCTTGAAAGCGGTCGGTCTTTTTTCCTTCAAGGTTGAAATTTTCCAGATCACAGACTTGCTTGTTAATATTACAAAGCATGTGTTGAAGCCTAAGCATCAGGTGCTGACTGATAGGCAGAAGAAAAATCTCCTTAAGAAATTCAATATCGAAGAAAAGCAGCTTCCCCGCATGCTACAGACTGATGCAATTGCACGATATTATGGACTTGAGAGGGGCCAAGTAGTTAAAGTTACCTATAGTGGTGAAATCACCCAGATGCATGTCACTTATCGATGTGTGTGGTGA 783 0.4649 MWVFLRIGQRGREMAGENGFQWERVGGEEAEQEGAEQEGAEQEGAEQVKGCLSKFIDDGTVESHRYYLSRRTTLEMLKDRGYSIPSNEIDLSLSQFRHMHGHSPDPDRLRLSLAHATNPSKRILVIFCGPGVVKVTAIRNIAGQIVNRDTLSGLILIVENHVTSQALKAVGLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKKNLLKKFNIEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEITQMHVTYRCVW 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01452 260 Pfam RNA polymerase Rpb5, C-terminal domain 187 259 IPR000783 GO:0003677|GO:0003899|GO:0006351
Phco2g01452 260 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 61 188 IPR036710 GO:0003677|GO:0003899|GO:0006351
Phco2g01452 260 Pfam RNA polymerase Rpb5, N-terminal domain 62 144 IPR005571 GO:0003677|GO:0003899|GO:0006351
Phco2g01452 260 Gene3D - 57 184 IPR036710 GO:0003677|GO:0003899|GO:0006351
Phco2g01452 260 SUPERFAMILY RPB5-like RNA polymerase subunit 185 260 IPR035913 -
Phco2g01452 260 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 60 260 IPR014381 GO:0003899
Phco2g01452 260 Gene3D - 185 260 IPR035913 -
Phco2g01452 260 FunFam DNA-directed RNA polymerases I, II, and III subunit RPABC1 185 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01452 Phco-Chr2 44032817 44037029 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01452 2 44032817 44037029 Phco2g01452 2 44032817 44037029 ECH