Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01447 ATGATTGCTATGGATACTTTGCTCAAAACACCTAACAAGCTTGAGTTTTTGCACCCACTTCACGGTTATTCAGAGAAATTAAGCAGTTCAGGCTCCTCTAGGGTGCAAAATCAGGATTTTAGGTTTGGTTCTAAGAAACCGCTTGTGAGATGGGGTAAATGTGGTGGTTTGCGGGCTAGTAGCAGTGCCCTTTTGGAGCTTGTTCCTGAATTCAAGAAGGAGAATCTGGATTTTGAACTTCCTTTGTATGATTCGTCAAAGGGGGCTGTGGTGGACCTTGCTGTTGTGGGAGGGGGGCCTGCAGGGCTTGCAGTTGCGCAGCAGGTTTCTGAGGCAGGGCTTTCAGTTTGTGCTATTGATCCAAACCCTAGGTTGATTTGGCCCAATAATTATGGGGTTTGGGTGGATGAGTTTGAGGCAATGGATTTGCTCGACTGCCTTGACACCACCTGGTCTGGCGCAGTTGTCTACATCGACGATAAAACAAAGAAGGATCTTGATAGGCCTTATGGTAGGGTCAATAGGAAGCTGCTGAAGTCGAAGATGCTGCAGAAATGTATCTCAAATGGTGTCAAGTTTCACCAGGCCAAAGTTATCAAGATTGTTCACGAGGATACCAAATCTTTGCTGGTTTGTAATGATGGTGTCACTGTTCAGGCTACAGTTGTTCTTGATGCAACTGGCTTTTCAAGATGCTTGGTTCAGTATGATAAACCGTATAACCCGGGTTACCAAGTTGCTTATGGGATTCTGGCTGAGGTTGATGAACACCCGTATGATGTAGATAAAATGCTTTTCATGGACTGGAGAGATTCTCATCTGGACAATGACAAGGAGCTGAAGCAGAGAAATAGTAGGATACCCACCTTTCTGTATGCAATGCCCTTTTCATCCACTAAGATATTTCTTGAAGAAACCTCCCTTGTAGCACGGCCTGGATTACGAATGGATGATATACAGGAAAGAATGGTTGCCAGGTTGAAACATTTGGGTATTAGAGTGAAAAGTATCGAAGAAGATGAGCACTGTGTGATTCCCATGGGTGGCCCCCTCCCAGTTCTTCCCCAAAGAGTTGTTGGCATTGGCGGTACCGCTGGGATGGTGCATCCTTCAACTGGGTATATGGTTGCAAGGACCCTGGCTGCAGCTCCTATTGTTGCTAATGCTATTGTTCAGAGCCTGGGCTCTGATAGAGGACTTTCCGGAGGAGATATATCTGCACAAGTGTGGAAAGATTTATGGCCCATCCAAAGGCGGCGACAAAGGGAGTTCTTCTGTTTTGGTATGGACATCTTGCTCAAGCTTGATTTACCTGGCACAAGGAGATTTTTTGATGCGTTTTTTGACCTGGAACCGCATTACTGGCATGGATTCTTATCATCAAGACTGTTTCTTCCTGAGCTCTTATTTTTTGGACTGTCTCTATTTTCTTATGCTTCTAATACGTCTAGGATAGAGATTATGGCGAAGGGAACACTTCCTTTGGCAAACATGATCAACAACTTGGTAAAAGATACAGAATAA 1524 0.4475 MIAMDTLLKTPNKLEFLHPLHGYSEKLSSSGSSRVQNQDFRFGSKKPLVRWGKCGGLRASSSALLELVPEFKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTKKDLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKIVHEDTKSLLVCNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPYDVDKMLFMDWRDSHLDNDKELKQRNSRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQERMVARLKHLGIRVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQSLGSDRGLSGGDISAQVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLFLPELLFFGLSLFSYASNTSRIEIMAKGTLPLANMINNLVKDTE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01447 507 PANTHER - 58 502 - -
Phco2g01447 507 Gene3D - 89 444 IPR036188 -
Phco2g01447 507 SUPERFAMILY FAD/NAD(P)-binding domain 91 474 IPR036188 -
Phco2g01447 507 NCBIfam lycopene cyclase family protein 92 487 IPR010108 GO:0016117|GO:0016705
Phco2g01447 507 FunFam lycopene epsilon cyclase, chloroplastic 88 426 - -
Phco2g01447 507 Pfam Lycopene cyclase protein 92 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01447 Phco-Chr2 43973470 43974993 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01447 2 43973470 43974993 Phco2g01447 2 43973470 43974993 ECH