Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01423 ATGGTTATACAACAGCACCCTAACACATCCCACGTGGCTGCTAATGTACTACATTTCTGCTGTTCTCAGCATATTGTGATTAAAGAGGGTCTATTGGTTTTATATTCATCATGCCTCTTTTTGGTGTCCTCATCATTCTCTTCTAACCAATATATTGCTTTGCTTTGCCACCCTTCCTCTCTCAAGCTTTGCTTCATATCTCGGCCAAATTGCTTGACTTGGACCCTTCTGATATATAATCCTTCAATTACAATGCTTTACTTTCTTATATCTTTTGTCTCGTTTCTAATCCTTTCCAAGTCCTTTACCAGTAAGCCTCTCTCGTCAAGGGAGAGTGGGACCAAAATAGGGTCAATTGGGTTTTGGGGGATCCTTTCAAGTTGGCTAGTTTCTAGTCTCAGAAAAGGAAGCACAACCACCCCTTGTAGCTTTTTTCGGTTTTCTCTTGTCATGTCATTGAAAAATAACAGTTTAGTGTCTACGGAGGAGAATGAGGAAGCCGAGGGGAAGGTTTCTCTCTTGGATTTGCCTGATTTACCATTGGAGTGTATCCTTGGGCACCTTTCACCTGCTGAATTATGTAGCGTGGCAACAGTGTGCACATATCTTAGGGATACAAGTAGAAGTGATCATTTATGGAAGAAACACATGGAGAGGAAATGGGGCGAAGTGTTTGGTGATGCTGCTTATAGACAATGGAAATGTCATGTAGCTTCCAAGACCAGAGCGAAGATCTCCAACCAGCAAAATCAGAAAGGAATATTTGCTTTCCTTCACGGTGATTTTCGCCCCCTGGTTTGGATCAAAGCAAAATCAGAAAAGGGAACACAGTTAAGTAGCTCATTACCGGAAGATTCAGTCATGGCTCTGTATCTTTCTCTTGAGAGTGGCAAATTTTGGTTCCCAGCTCAAGTCTATAACCGTGAGAACGGTCATGCTGGGTTCATGCTCTCATGTTATGATGCCCAACTTTGCTATGACTCTCGATCTGACACTTTTCGGGCAAGGTACTCACCTCATGGGAGATGGACAACTGAGGAAAACATACAATGGGACCGACTCAGAGTGCCACCAATTGCCTCTTCTCCACATGCTCTTCACATCTCTGACTGTTTGGATAACTTGAGACCTGGAGATCACATTGAGATCCAGTGGAGAAGAAACAAAGACTTCCCATATGGTTGGTGGTATGGTGTAATTGGTCATTTGGAACAATGTCAAGTGCATGGGAACCATTGCCTTTGTCAAAATAATGATATGGTGATTTTGGAGTTCACACAGTACACTGCTGGATCCAGATGGAGACAAACCATGATAGACAGGAAGCATCATATAGAAAAAGGCAATGAGATAGATGGTTTTTATGGAGGAATCAGGAAGCTGCATAGCAGGGAAGAAATTACAAGGTGGAAGAAACTGTGGCCAACCAAAACTGTGGTACATGATTGA 1449 0.4265 MVIQQHPNTSHVAANVLHFCCSQHIVIKEGLLVLYSSCLFLVSSSFSSNQYIALLCHPSSLKLCFISRPNCLTWTLLIYNPSITMLYFLISFVSFLILSKSFTSKPLSSRESGTKIGSIGFWGILSSWLVSSLRKGSTTTPCSFFRFSLVMSLKNNSLVSTEENEEAEGKVSLLDLPDLPLECILGHLSPAELCSVATVCTYLRDTSRSDHLWKKHMERKWGEVFGDAAYRQWKCHVASKTRAKISNQQNQKGIFAFLHGDFRPLVWIKAKSEKGTQLSSSLPEDSVMALYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFRARYSPHGRWTTEENIQWDRLRVPPIASSPHALHISDCLDNLRPGDHIEIQWRRNKDFPYGWWYGVIGHLEQCQVHGNHCLCQNNDMVILEFTQYTAGSRWRQTMIDRKHHIEKGNEIDGFYGGIRKLHSREEITRWKKLWPTKTVVHD 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01423 482 Pfam F-box domain 173 215 IPR001810 GO:0005515
Phco2g01423 482 SMART fbox_2 176 216 IPR001810 GO:0005515
Phco2g01423 482 PANTHER ESTS AU081301(E20138) 85 478 - -
Phco2g01423 482 SUPERFAMILY F-box domain 162 224 IPR036047 GO:0005515
Phco2g01423 482 ProSiteProfiles F-box domain profile. 170 216 IPR001810 GO:0005515
Phco2g01423 482 Gene3D - 159 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01423 Phco-Chr2 43507584 43510699 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01423 2 43507584 43510699 Phco2g01423 2 43507584 43510699 ECH
Phco2g01423 2 43507584 43510699 Phco6g00385 6 3661293 3665594 PCT