Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01412 ATGGCTTTGCATAAGATTCTGCAAAGGGGTCGTCCATTCTTCAATCCTCCTCTGCAACTTGTTACTCCCTTTTCCCCGTCTTCAGCTTCTCACACATTCCCGACTTGTGGGGATGAATCTCTTCATGTTCGGGAAATCACAAACACAAGAGAAGTTAGGAATGAATTTGACAAATACCATATATCTCAATGCCTCAACTGGATTTCAAGGCCAAATTACTGTAGTCAGGATTCATGCTATGTGGTAAATCGTCATTTTACATCTGATCGCAATGATATAGGCACAAAGGGGTTCTCAAGCAAGCTTCTTAAAACTATTCCATACTATGTGAAGATAGTGGAGGTTGGTGCAAGGGATGGATTGCAAAATGAGAAGGCTATTATTCCTACTAATGTAAAAGTTGAGTTAATACAACTACTGGTTTCTTCTGGGTTGTCTGTTGTTGAGGCAACAGGTTTTGTCTCTCCAAAATGGGTACCCCAGTTGGCAGATGCAAAGGATGTGTTGGCAGCAATTCAAAATGTTGAAGGTGCTAGGTTTCCTGTCTTGACTCCAAACATTAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAAGAAGTGGCTGTTTTTCCTGCAGCTTCTGAATCATTCTCAAAAGCAAATTTAAATTGTGGCATTGAAGATAATCTTGCTCGTTGCCGTGATATTGCTTCAGCTGCTGGAAGCCTCTCGATCCCAGTTCGTGGATATATATCATGTGTTGTGGGATGTCCTCTGGAAGGAAATATTGCCCCAGAGAAAGTAGCATATGTGGCAAAATCACTGTATGAGATGGGTTGCGCAGAGATTTCACTGGGTGATACAATTGGTGTTGGCACACCTGGTACTGTCATTCCGATGCTTGAAGCTGTTCGTGACGTTGTTCCAATTGACATGCTTGCTGTCCATTTTCACGATACTTATGGTCAGGCACTTTCAAATATTTTAATTTCACTTCAGATGGGTATCAGCACAGTGGATTCATCTGTTGCTGGTCTTGGAGGCTGTCCATATGCGAAGGGTGCAACTGGGAATGTAGCCACTGAGGATGTCGTTTACATGCTGAATGGACTTGGAGTGAAAACAAACGTGGACCTTGGAAAGCTTATGCTTGCTGGGGATTTCATTTGCAGACATTTAGGACGTGCATCTGGTTCCAAAGCAGCTACTGCTTTGAGTAAAGTTACTAGTCATGCCTCCAAACTATGA 1230 0.4285 MALHKILQRGRPFFNPPLQLVTPFSPSSASHTFPTCGDESLHVREITNTREVRNEFDKYHISQCLNWISRPNYCSQDSCYVVNRHFTSDRNDIGTKGFSSKLLKTIPYYVKIVEVGARDGLQNEKAIIPTNVKVELIQLLVSSGLSVVEATGFVSPKWVPQLADAKDVLAAIQNVEGARFPVLTPNIKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIASAAGSLSIPVRGYISCVVGCPLEGNIAPEKVAYVAKSLYEMGCAEISLGDTIGVGTPGTVIPMLEAVRDVVPIDMLAVHFHDTYGQALSNILISLQMGISTVDSSVAGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICRHLGRASGSKAATALSKVTSHASKL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01412 409 ProSitePatterns Hydroxymethylglutaryl-coenzyme A lyase active site. 336 345 IPR000138 GO:0004419
Phco2g01412 409 SUPERFAMILY Aldolase 106 403 - -
Phco2g01412 409 Gene3D Aldolase class I 104 402 IPR013785 -
Phco2g01412 409 Pfam HMGL-like 110 382 IPR000891 GO:0003824
Phco2g01412 409 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 104 402 - -
Phco2g01412 409 CDD DRE_TIM_HMGL 112 385 - -
Phco2g01412 409 ProSiteProfiles Pyruvate carboxyltransferase domain. 110 377 IPR000891 GO:0003824
Phco2g01412 409 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 86 403 IPR043594 GO:0016833
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01412 Phco-Chr2 43341176 43349464 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01412 2 43341176 43349464 Phco2g01412 2 43341176 43349464 ECH