Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01396 ATGGCGTCAAGAGCAATAGTTCAACAACAAGCCAGAGGTGAAGCAGTGATAGGAGGAGGAAAGCAACTGAAGAAGAATGGAATAGCGGATGGAAAGAATCGCAAGGCGTTGGGTGATATTGGGAATTTGGCCAATGTAAGAGGAGTTGAAGTCAAGCCTCATCGCCCCATCACAAGGAGTTTTGGTGCCCAACTACTTGCCAATGCACAAGCCGCAGCAGTTGTAGAGAATAACAAGAAACAAGCTTGTGCTAATGTGGCTGGTCCTGCTCCTGTTGCTGTGGCCAAGAGAGTACCTAAGCCTGCTCAGAAGAAAGTTACGGTCAAACCAAAGCCTGAGGAAGTCATTGACATTGAAGATAGTCCAGACAAGGAGGTCCAGAAAGACAAGAAAAAGGAAGGAGATTGCAAGTCCAAGAAGAATTCACAAGCTTTTACTTCAGTTCTCACGGCTAGAAGCAAGGCAGCATGTGGCATAACTAACAAACCAAAGGAGAATATTATTGACATCGATGCCAGTGATGTTGAGAACGAACTTGCTGCTGTGGAGTATATTGATGACATTTACAAGTTCTATAGACTTGTTGAGCACGAAAGCCGCCCCCATGACTACATAGACTCTCAACCTGAGATAAATGAGAGGATGAGAGCTATTTTGGTTGATTGGCTGATTGATGTCCACAGCAAGTTTGAACTTTCACTAGAGACCCTTTACCTGACCATCAATATAATCGATCGATTCCTAGCAGTTAAGACTGTTCCAAGAAGGGATCTGCAATTGGTTGGTGTCAGTGCCATGCTAATGGCATCCAAATATGAAGAAATCTGGCCACCTGAGGTTAATGACTTTGTACACCTCGCAGATAGGGCTTATACTCATGAACAGATACTTGTTATGGAAAAAATTATACTGGGAAAGTTGGAATGGACTTTGACTGTTCCCACAACTTTTGTTTTCCTAGTGCGTTTTATCAAGGCATCTGTCCCAGATCAGGAGTTGGAAATCATGTCCCATTTTCTATCTGAGTTGGGAATGATGAATTACGCGACCTTAAAGTATTGCCCATCAATGCTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCACCCTGAATAAGACTCCCCTTTGGAATGAGACACTTAAGTTGCACACGGGTTACTCACAAGAACAACTTATGGATTGTGCTAGACTATTGGCGAGCTTCCACTCCTCGGTTGGAAATGGAAAGCTGAAAGTTGTGTACAGAAAATATTCTGATCCTCAGAAGGGAGCTGTAGCTGTACGCCCACCAGCTAAATATCTTCTGCCTGAAGGTTCTGCCTCCCAATAA 1329 0.4402 MASRAIVQQQARGEAVIGGGKQLKKNGIADGKNRKALGDIGNLANVRGVEVKPHRPITRSFGAQLLANAQAAAVVENNKKQACANVAGPAPVAVAKRVPKPAQKKVTVKPKPEEVIDIEDSPDKEVQKDKKKEGDCKSKKNSQAFTSVLTARSKAACGITNKPKENIIDIDASDVENELAAVEYIDDIYKFYRLVEHESRPHDYIDSQPEINERMRAILVDWLIDVHSKFELSLETLYLTINIIDRFLAVKTVPRRDLQLVGVSAMLMASKYEEIWPPEVNDFVHLADRAYTHEQILVMEKIILGKLEWTLTVPTTFVFLVRFIKASVPDQELEIMSHFLSELGMMNYATLKYCPSMLAASAVFAARCTLNKTPLWNETLKLHTGYSQEQLMDCARLLASFHSSVGNGKLKVVYRKYSDPQKGAVAVRPPAKYLLPEGSASQ 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01396 442 Gene3D - 187 426 - -
Phco2g01396 442 PANTHER CYCLINS 135 419 IPR039361 -
Phco2g01396 442 ProSitePatterns Cyclins signature. 216 247 IPR006671 -
Phco2g01396 442 Gene3D - 201 312 - -
Phco2g01396 442 CDD CYCLIN_AtCycB-like_rpt2 314 430 - -
Phco2g01396 442 SMART Cyclin_C_2 314 431 IPR004367 -
Phco2g01396 442 SMART cyclin_7 221 305 IPR013763 -
Phco2g01396 442 SMART cyclin_7 318 400 IPR013763 -
Phco2g01396 442 FunFam G2/mitotic-specific cyclin 200 308 - -
Phco2g01396 442 MobiDBLite consensus disorder prediction 100 139 - -
Phco2g01396 442 SUPERFAMILY Cyclin-like 313 433 IPR036915 -
Phco2g01396 442 MobiDBLite consensus disorder prediction 106 139 - -
Phco2g01396 442 Pfam Cyclin, N-terminal domain 187 311 IPR006671 -
Phco2g01396 442 PIRSF Cyclin_A_B_D_E 1 442 IPR046965 GO:0016538|GO:0044772
Phco2g01396 442 FunFam G2/mitotic-specific cyclin-1 309 426 - -
Phco2g01396 442 Pfam Cyclin, C-terminal domain 314 428 IPR004367 -
Phco2g01396 442 SUPERFAMILY Cyclin-like 176 311 IPR036915 -
Phco2g01396 442 CDD CYCLIN_AtCycB-like_rpt1 164 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01396 Phco-Chr2 43030067 43032438 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01396 2 43030067 43032438 Phco2g01396 2 43030067 43032438 ECH