Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01379 ATGCCAATGGCAAATTCTCATCAAAATCAACTCAAAACTGAAGACTCAGAATTCCCTTTCAAGAAAATTGGAAATGAAGGTCTTACAAAGCGGATTCTCAGAAAAGGAGTCACTTGGCAAACTCCATTCTCTGGAGATGAAGTGGAAGTTCATTTCAGAGGACATGTTGAGAATGGAGCATCTCTTGAATCCAGTAATGATAAAGGGTCCACCTTTCGTTTCAAATTAGGCCAGTGTGAAGTTATCAGAGGCTGGGATGAAGGAGTTGCCACCATGAAGAAAGGGGAGAGAGCAATCTTCAAAATACCACCTAACTTGGCATATGGGGAAGAAGGGTCTCCTCCATTGGTTCCTCCAAATGCAACTCTCATTTATGACATTGAAATGCTGACTTGGAGCATCATAAGGGATTTGACTGGCGATGGAGGAATCATGAAAAAGCTAACTAGAGAGGGAGAAGGGTGGGCAACTCCCAGAGAGGCTGATGAGGTGCTAGTGAAATATGAAGCAAGGCTGGAGAATGGGATGCTTGTCTCAAAATCTGATCAGGGAGTGGAGTTTAATGTAAGTGATGGCTATCTATGTCCTGCTATGAGTATAGCAGTAAAGACAATGAGAAAGGGCGAGGTGGCAGAACTAGCAGTGAGATTATTTTACGGGTACAGTCAAAATTCAAATATGATCACTGAGCTAGATGGTGTTCCTCCTCCAGATTCTAATTTAGCTAGTATCAAGCTTGAGCTGGTATCATGGAAAATTGTTACTGATGTCACAGGAGACAAGAAGATACTGAAAAAAATTAAGAAAGTGGGTGAGGGGTTTGATCGTCCTAACGAGGGATCCCAAGTGAAAGTGATATATCTGTGTAAAGGGGAAGATGATACGATTATTGAGAGGAAAGGATCAGAGGAAGAACCTTTTGAGTTTACAACTCAGGAAGAAGAAGTACCCGAGGGTCTAGAAAGAGCAATAATGACAATGAAGAAAGCAGAACAAGCTCTTGTAACCGTCGATGCAGAATACTTGTCCGGCTGTAATAATTCACAGGGAAACACAGAAAATCATAAAGTCCTTTATTATGAAGTTGAGTTGGTTGATTTTGTTAAGGAAAAACCATTTTGGAAAATGGACACACAAGAGAAAATAGAAGCTTGTGAGAGGAAGAAGTATGATGGAAATCTGCTGTTCAAAGCTGAAAATTTCATGCTCGCATCTAAGAAATATGAAAAGGCTGTAAAGTACATCGAGTTTGATCACTCATTCAGTGAAGATGAGAAGCATCGCTCTAATACCTTACGTTTATCCTGTAACTTGAACAATGCTGCCTGTAAACTTAAATTGGGAGAGTACATTGAAGCTTCAAGACTATGCACAAAGGTTCTAGACCAAGAACCTGTAAATATCAAGGCTCTTTATAGAAGATGCCAAGCATACGTGAAAACATCAGACTTGGAGAAAGCTGAGGCTGACATTAAAAGAGCTTTGACTATTGATCCAAATAACAGAGACATTAAACTTGAGTACAAAGAGCTGAAACTTAAGCAAAAGGAATACAGTAGATATGAAGCTGGCATCTTCAGCACAATGGTTTCAAGAATGAGCTAG 1605 0.4012 MPMANSHQNQLKTEDSEFPFKKIGNEGLTKRILRKGVTWQTPFSGDEVEVHFRGHVENGASLESSNDKGSTFRFKLGQCEVIRGWDEGVATMKKGERAIFKIPPNLAYGEEGSPPLVPPNATLIYDIEMLTWSIIRDLTGDGGIMKKLTREGEGWATPREADEVLVKYEARLENGMLVSKSDQGVEFNVSDGYLCPAMSIAVKTMRKGEVAELAVRLFYGYSQNSNMITELDGVPPPDSNLASIKLELVSWKIVTDVTGDKKILKKIKKVGEGFDRPNEGSQVKVIYLCKGEDDTIIERKGSEEEPFEFTTQEEEVPEGLERAIMTMKKAEQALVTVDAEYLSGCNNSQGNTENHKVLYYEVELVDFVKEKPFWKMDTQEKIEACERKKYDGNLLFKAENFMLASKKYEKAVKYIEFDHSFSEDEKHRSNTLRLSCNLNNAACKLKLGEYIEASRLCTKVLDQEPVNIKALYRRCQAYVKTSDLEKAEADIKRALTIDPNNRDIKLEYKELKLKQKEYSRYEAGIFSTMVSRMS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01379 534 SUPERFAMILY TPR-like 375 522 IPR011990 GO:0005515
Phco2g01379 534 SUPERFAMILY FKBP-like 16 130 - -
Phco2g01379 534 ProSiteProfiles TPR repeat profile. 468 501 IPR019734 GO:0005515
Phco2g01379 534 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 45 133 IPR001179 GO:0003755
Phco2g01379 534 SUPERFAMILY FKBP-like 138 224 - -
Phco2g01379 534 FunFam Peptidylprolyl isomerase 373 528 - -
Phco2g01379 534 Pfam Tetratricopeptide repeat 469 501 IPR001440 GO:0005515
Phco2g01379 534 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 157 226 IPR001179 GO:0003755
Phco2g01379 534 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 276 365 IPR001179 GO:0003755
Phco2g01379 534 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 42 130 IPR001179 GO:0003755
Phco2g01379 534 Gene3D - 135 252 IPR046357 GO:0003755
Phco2g01379 534 SMART tpr_5 434 467 IPR019734 GO:0005515
Phco2g01379 534 SMART tpr_5 385 418 IPR019734 GO:0005515
Phco2g01379 534 SMART tpr_5 468 501 IPR019734 GO:0005515
Phco2g01379 534 FunFam Peptidyl-prolyl cis-trans isomerase 21 133 - -
Phco2g01379 534 Coils Coil 320 340 - -
Phco2g01379 534 SUPERFAMILY FKBP-like 249 387 - -
Phco2g01379 534 Gene3D Tetratricopeptide repeat domain 371 527 IPR011990 GO:0005515
Phco2g01379 534 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 161 250 IPR001179 GO:0003755
Phco2g01379 534 Gene3D - 2 134 IPR046357 GO:0003755
Phco2g01379 534 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 280 368 IPR001179 GO:0003755
Phco2g01379 534 Gene3D - 253 370 IPR046357 GO:0003755
Phco2g01379 534 PANTHER PEPTIDYLPROLYL ISOMERASE 23 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01379 Phco-Chr2 42732620 42737883 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01379 2 42732620 42737883 Phco2g01379 2 42732620 42737883 ECH