Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01375 ATGGTGAATCCAGGATTGTTTTCTGGGAATAAGTCCGTGAATTCGGTGAAAGTAAGCTTTCGGATACCGTATTTTACACAATGGGGTCAGAGCTTGCTGGTGTGTGGCTCTGTACCCGTGCTTGGTGCCTGGAATGTGAAGAGGGGTGTGTTGCTCAGTGTTATTCATCAAGGGAGTGAGCTCATCTGGGGTGGAAGCATCACAGTGCCAAGAGGGTTCCAATGCCAGTACAGCTATTATGTTGTAGATGATAAGAAAAATGTACTGAGATGGGAGGCGGGGAAGAAGCGCGAACTGATAATTCCTGAAGGGGTTCAGAGTGGACAGGAGATCGTGTTCCGTGATCTTTGGCAGGCTGCCTCAGATGCCCTCCCTTTCAGAAGTGCTTTCAAAGATGTCATTTTTCGGGAAAGCTGGGATTTGAACGACACAACTGTAGGAGTCAACCACATTAATTTTGAACCAGAAAGAGAAGCTGTCCTGGTCCAATTCAAAATTTCCTGCCCTAATGTTGAGAAAGACTCATCAATATATGTCATTGGTAGCAACACAAAGTTGGGTCAGTGGAAAGCTGAAAAGGGACTAAAACTCAGCTATTTTGGTGAATCTGTCTGGAAAGCTGAATGTGTTATGCAAAGGAGTGATTTTCCATTAAGATATCCATTTTGGACTCTTCATCATAAACGATATGAAGAAATTGTGGTTAAATCCACATATAGATATGGAAAATATGATAGGAGTGGGAAATTTTCTATAGAGACTGGTTCAAACCGAGAAGTTTCTACCAACTCCTCAATGAATGATGTGAAATATATTTTTCTCTCAGATGGCATGCTGCGGGAAACACCTTGGCGTGGTGCTGGTGTAGCTATCCCTATGTTTTCTGTTAGGTCGGAATCTGATCTGGGTGTTGGAGAGTTTCTTGACCTTAAGTTGCTAGTTGACTGGGCTGTAGCATCTGGTTTCCATTTAGTTCAACTTTTACCTATCAATGATACATCTGTGCATGGGATGTGGTGGGATTCTTATCCATACAGTTCACTATCGGTCTTTGCATTGCATCCATTGTACCTGAGAGTACAGGCTCTTTCCAAGAACATACCAGAGGAGATCAAGAAAGAAATGGACAAGGCAAAGCAGCAATTAGATGGGAAGGATGTTGATTATGAAGCTACAATGGCCACTAAACTCTCAATTGCTAAGAAAGTTTTCGCTGAAGAGAAAGATTTGATACTCAATTCAAGTTCCTTCCAGGAGTTCTTTTTGGAGAATGAGGGTTGGTTGAAACCCTATGCTGCTTTCTGTTTCCTGCGGGACTTCTTTGAAACATCAGATCGTAGTCAATGGGGTCGTTTTGCTCATTATTCGGATGATAAGCTAGAGAAGCTTGTATCCAAGGACAGCCTGCACTATGAGATAATTTGCTTCCACTACTATGTTCAATATCATTTACATTTACAATTATCAGAAGCTGCAGAGTATGCAAGAAAGAAGGGAGTGATATTAAAGGGAGACCTTCCTATTGGAGTTGACAGAAACAGTGTGGACACCTGGGTTTATCCAAATTTGTTCCGAATGAACACTTCTACTGGGGCACCTCCAGATTATTTTGATAAAAATGGCCAGAATTGGGGTTTCCCTACTTATAATTGGGAAGAAATGTCAAAGGACAACTATGGTTGGTGGCGAGCTCGATTGACACAGATGGCAAAATATTTTACGGCTTACAGGATTGATCACATATTGGGATTCTTCCGTATATGGGAACTTCCAGATCATGCTGCAACAGGTCTAGTTGGAAAATTCCGGCCATCTATACCTCTAAGTCAGGAAGAACTTGAAAGAGAAGGGATATGGGACTTTAATCGCCTGAGTCGCCCATATATTAAGCGGGAATTGTTAGAGGAAAAATTTGGAGCAGCTTGGACATTTGTTGCAACAACTTTTCTAAATGAATTTGACAAGAACTTCTATGAGTTCAAGGAGGATAGCAACACAGAGAAAAAAATTGCTTCCAAACTGAAAACTTGTGCAGAAAGTTCTCTATTGTTGGAAAGTGAAGACAAACTCCGGCGCAATCTCTTCGATCTTTCACAGAATATAGTCTTAATCCGAGATCCAGAGTATCCAAGAAAATTTTATCCTCGTTTCAACCTTGAAGATACCTCAAGTTTCCAGGATTTGGATGATCATAGCAAGAATGTTCTCAAGAGATTATATAATGACTACTACTTCTGTCGTCAAGAGAATCTTTGGAGCCAAAATGCATTGAAAACCCTGCCTGTACTTCTAAATTCGTCAGACATGCTGGCCTGTGGGGAAGATTTGGGCCTCATTCCATCTTGTGTCCACCCTGTTATGCAAGAACTGGGATTAGTTGGGTTGCGCATTCAGCGTATGCCCAATGAACCTGATCTGGAATTTGGTATTCCTTCTCAGTACAGCTACATGACGGTATGCGCCCCATCATGTCATGATTGTTCAACCTTGCGTGCTTGGTGGGAAGAAGATGAAGATAGAAGACTCCGGTTTTTCAAGAATGTGATGGAGTCAGATGAGTTGCCTCCGGATCAATGTGTTCCAGAAGTTGCACATTTTGTTATAAGGCAACATTTTGAAGCTCCATCAATGTGGGCAATCTTCCCTCTTCAGGACTTGTTAGCATTAGAAGAAGAATATACAACACGCCCTGCAACAGAGGAGACAATCAATGACCCTACAAATCCAAAGCACTATTGGAGATATCGTGTGCATGTAAGTTTGGAATCATTGATTAAGGATGTTGAGCTCCAAACCACCATCAAAGATCTTGTACGTTGGAGTGGAAGATCACTCCCTAAGGAAGATTCAGGAGTAGATGCCAGCCTAGTGGCAGCATTGTCAGTAGCAGAAGCTGTTTCAGTGTTGTCAGTAGCAGAAGCTGTTTCTGGGAAACAGAAGTTTTCCAGTACCACGGAAAAACCTGTTCTTGTCAAATAA 2979 0.4199 MVNPGLFSGNKSVNSVKVSFRIPYFTQWGQSLLVCGSVPVLGAWNVKRGVLLSVIHQGSELIWGGSITVPRGFQCQYSYYVVDDKKNVLRWEAGKKRELIIPEGVQSGQEIVFRDLWQAASDALPFRSAFKDVIFRESWDLNDTTVGVNHINFEPEREAVLVQFKISCPNVEKDSSIYVIGSNTKLGQWKAEKGLKLSYFGESVWKAECVMQRSDFPLRYPFWTLHHKRYEEIVVKSTYRYGKYDRSGKFSIETGSNREVSTNSSMNDVKYIFLSDGMLRETPWRGAGVAIPMFSVRSESDLGVGEFLDLKLLVDWAVASGFHLVQLLPINDTSVHGMWWDSYPYSSLSVFALHPLYLRVQALSKNIPEEIKKEMDKAKQQLDGKDVDYEATMATKLSIAKKVFAEEKDLILNSSSFQEFFLENEGWLKPYAAFCFLRDFFETSDRSQWGRFAHYSDDKLEKLVSKDSLHYEIICFHYYVQYHLHLQLSEAAEYARKKGVILKGDLPIGVDRNSVDTWVYPNLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIPLSQEELEREGIWDFNRLSRPYIKRELLEEKFGAAWTFVATTFLNEFDKNFYEFKEDSNTEKKIASKLKTCAESSLLLESEDKLRRNLFDLSQNIVLIRDPEYPRKFYPRFNLEDTSSFQDLDDHSKNVLKRLYNDYYFCRQENLWSQNALKTLPVLLNSSDMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPNEPDLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEDRRLRFFKNVMESDELPPDQCVPEVAHFVIRQHFEAPSMWAIFPLQDLLALEEEYTTRPATEETINDPTNPKHYWRYRVHVSLESLIKDVELQTTIKDLVRWSGRSLPKEDSGVDASLVAALSVAEAVSVLSVAEAVSGKQKFSSTTEKPVLVK 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01375 992 SMART CBM_20_2 159 272 IPR002044 GO:2001070
Phco2g01375 992 SMART CBM_20_2 15 111 IPR002044 GO:2001070
Phco2g01375 992 SUPERFAMILY Starch-binding domain-like 14 117 IPR013784 GO:0030246
Phco2g01375 992 Pfam 4-alpha-glucanotransferase 291 919 IPR003385 GO:0004134|GO:0005975
Phco2g01375 992 Gene3D Immunoglobulins 8 119 IPR013783 -
Phco2g01375 992 Gene3D Immunoglobulins 153 273 IPR013783 -
Phco2g01375 992 Gene3D Glycosidases 284 615 - -
Phco2g01375 992 SUPERFAMILY Starch-binding domain-like 159 264 IPR013784 GO:0030246
Phco2g01375 992 SUPERFAMILY (Trans)glycosidases 284 937 IPR017853 -
Phco2g01375 992 Gene3D Glycosidases 741 944 - -
Phco2g01375 992 PANTHER - 13 944 - -
Phco2g01375 992 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 10 119 IPR002044 GO:2001070
Phco2g01375 992 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 154 286 IPR002044 GO:2001070
Phco2g01375 992 CDD CBM20_DPE2_repeat1 17 117 IPR034840 GO:2001070
Phco2g01375 992 Pfam Starch binding domain 16 108 IPR002044 GO:2001070
Phco2g01375 992 Pfam Starch binding domain 160 268 IPR002044 GO:2001070
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01375 2 42670977 42687580 Phco2g01375 2 42670977 42687580 ECH