Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g01371 | ATGACAGCTCAGACTCAAGAGGATCTTCTTGCGGCTCACCTCGAACAGGAAAAGATCCATGATGACGAGCCTGTAGTAGAGGATGAGGATGAGGATGAGGAAGATGATGATGAAGATGATGAGGATGATGACAATGCTGAAGGTCTAGAGGGTGATACATCTGGTAGATCCAAGCAGACCAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTCAAACTTGGAATGAAGCCTATCACAGGTGTCAGTCGTGTGACTGTCAAGAAGAGCAAGAACATCCTTTTTGTTATCTCAAAACCGGATGTTTTCAAGAGTCCAACTTCTGACACATACATTATATTCGGGGAAGCAAAGATTGAGGACTTGAGTTCACAGCTACAGACTCAGGCAGCAGAACAATTCAAGGCTCCTAATGTGAGCAATGTCGGATTGAAGCCTGAAACCTCTGCTACTGCTCAAGATGATGAAGATGTGGACGAGTCTGATGTAGATCCCAAGGATATAGAGTTGGTGATGACTCAAGCTGGTGTGGTAAGATCAAGAGCTGTTAAGGCCCTCAAAACTGCCAATGGCGATATTGTTGCTGCCATTATGGAGCTAACTAATTGA | 606 | 0.4472 | MTAQTQEDLLAAHLEQEKIHDDEPVVEDEDEDEEDDDEDDEDDDNAEGLEGDTSGRSKQTRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNVSNVGLKPETSATAQDDEDVDESDVDPKDIELVMTQAGVVRSRAVKALKTANGDIVAAIMELTN | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g01371 | 201 | Pfam | NAC domain | 63 | 118 | IPR002715 | - | |
| Phco2g01371 | 201 | Pfam | HYPK UBA domain | 162 | 200 | IPR044034 | - | |
| Phco2g01371 | 201 | MobiDBLite | consensus disorder prediction | 49 | 70 | - | - | |
| Phco2g01371 | 201 | FunFam | Nascent polypeptide-associated complex (NAC), alpha subunit | 70 | 122 | - | - | |
| Phco2g01371 | 201 | MobiDBLite | consensus disorder prediction | 22 | 48 | - | - | |
| Phco2g01371 | 201 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - | |
| Phco2g01371 | 201 | MobiDBLite | consensus disorder prediction | 136 | 164 | - | - | |
| Phco2g01371 | 201 | Gene3D | - | 69 | 122 | IPR038187 | - | |
| Phco2g01371 | 201 | Gene3D | - | 161 | 199 | - | - | |
| Phco2g01371 | 201 | CDD | NAC_NACA | 74 | 121 | - | - | |
| Phco2g01371 | 201 | CDD | UBA_NAC_euk | 164 | 200 | - | - | |
| Phco2g01371 | 201 | SMART | NAC_2 | 63 | 119 | IPR002715 | - | |
| Phco2g01371 | 201 | ProSiteProfiles | NAC A/B domain profile. | 60 | 125 | IPR002715 | - | |
| Phco2g01371 | 201 | PANTHER | NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED | 21 | 200 | IPR016641 | GO:0005854 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco2g01371 | Phco-Chr2 | 42617295 | 42619159 | Tandem |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco2g01371 | 2 | 42617295 | 42619159 | Phco2g01371 | 2 | 42617295 | 42619159 | ECH |