Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01318 ATGGCCACTAATGAAAATCTTCCACCAAATGTTATAAAGCAACTTGCCAAGGAGTTGAAAAATCTCGACGAGTCCCCTCCCGAGGGCATTAAAGTTGTAGTAAATGATGATGATTTTTCAACTATATTTGCTGACATTGAAGGCCCGGCTGGAACTCCTTATGAGAATGGAGTTTTCCGCATGAAGCTGTTGCTATCTCACGATTTTCCTCATTCTCCACCAAAAGGTTTTTTCTTGACTAAGATTTTCCATCCAAACATTGCAACCAATGGAGAGATTTGTGTCAACACACTTAAAAAGGATTGGAATCCTAGCCTTGGTTTACGTCATGTTCTTATTGTTGTTAGGTGTCTATTGATTGAACCATTTCCAGAATCAGCTCTAAATGAACAGGCTGGTAAAATGCTGCTTGAAAATTATGACGAGTATGCTAGACATGCTAGGCTTTACACTGGAATCCATGCAAAACCAAAGCCCAAATTTAAGAGTGGAGCTATCTCCGAATCAACTACTGCTCTGAATGTTGATCAGACAAACACCTCTGTGCTCAGTGCTGACGTTAAAACCACTTCAGCGAGTGCTGCATTACCAGTGGCAGTGGCAGTGCCTGCAACAAGAGGAAATAGTCAGGAACAGGCAGCCACCTCTGTGATTACTTCTGCTACAGTCATTTCTACTGCTTCTGCACCTCAGAAGAAGGAAGCAAAAGCTCTGGTGGACAAGAAGAAGATAGATGCCAGAAAGAAAAGTTTGAAAAGATTGTAA 765 0.4157 MATNENLPPNVIKQLAKELKNLDESPPEGIKVVVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGFFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGAISESTTALNVDQTNTSVLSADVKTTSASAALPVAVAVPATRGNSQEQAATSVITSATVISTASAPQKKEAKALVDKKKIDARKKSLKRL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01318 254 CDD UBCc 12 151 IPR000608 -
Phco2g01318 254 SMART ubc_7 13 156 - -
Phco2g01318 254 FunFam Ubiquitin-conjugating enzyme E2 22 4 157 - -
Phco2g01318 254 SUPERFAMILY UBC-like 5 160 IPR016135 -
Phco2g01318 254 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 13 156 - -
Phco2g01318 254 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 156 IPR000608 -
Phco2g01318 254 Gene3D Ubiquitin Conjugating Enzyme 4 157 IPR016135 -
Phco2g01318 254 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 83 98 IPR023313 -
Phco2g01318 254 Pfam Ubiquitin-conjugating enzyme 15 150 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01318 Phco-Chr2 41536586 41538696 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01318 2 41536586 41538696 Phco2g01318 2 41536586 41538696 ECH