Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01209 ATGGATCTGGATGGAATGGCTAAAATCTCCATGTTGTTGGTGGGGCTTTGTTTACTACTTAACTGGGCAGGGTTGTTGAGTGTAGATCAAATGAAGTACAAGGACCCTAACCAGTCAATAGATACTCGGGTTGAGGATCTTGTTAGCAGGATGACTCTTGAGGAGAAAATTGGTCAAATGTTGCAGGTTGAGCGGAAGCATGCATCTGCTGAATTGGTTAAGAAGTATTTCATTGGGAGTGTAATGAGTGAGGGAGGGAGTATTCCGGCTCCACAGGCATCTGCTGAAACCTGGGTTGACATGGTGAATGAATTTCAGAAGGGTGCTGTGTCAACCCGGCTTGGAATTCCAATGTTTTATGGTGTTGATGCTGTTCATGGCCACAACACTGTTCACAATGCAACTATTTTTCCTCACAATATTGGTCTTGGAGCTACCAGGGAGCCTGAACTAGTTAAGAGAATTGGAGCTGCAACTGCACTTGAAGTTAGAGCAACAGGAATTCAATATGCTTATGCACCCTGTATAGCAGTCTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGTGAAGATACTGAACTAGTTCAAGCTATGACCGAAATCATACCAGGATTGCAAGGGGACATCCCTGATAATTTGCCAAAGGGTGTCCCTTTTATCGCTGGAAAAGAAAAAGTTTTAGGTTGTGCTAAGCACTATGTGGGTGACGGTGGAACAATCGATGGGATTAATGAGCACAACACTGTTATAGATAGAGATGGATTGATGAAAATTCACATGCCAGCCTACTTGACCTCAATCAGTAAAGGTGTGGCAACCATTATGGTCTCTTACTCCAGTTGGAATGGTGTAAAAATGCATGCTCACCATGATCTTATTACTGGCTTCCTCAAGAATACTCTCCATTTCAAGGGCTTTGTCATTTCAGATTTTGAGGGTATTGATAGGATCACATCTCCACATCGTGCAAACATCACTTATTCAATCGAAGCAGGAGTTTCTGCTGGCATTGACATGTTCATGTTTCCAAAGCTTTACACAGAATTCATAGATGGTCTATCCATGTTGGTGAAAAATAATCGCATTCCCATGAGTCGAATTGATGATGCGGTGAGAAGAATTTTGTGGGTTAAGTTCATGATGGGTCTTTTTGAGAACCCTTTTGCTGATTACAGTTTGACCAAATATTTGGGAATCCAGGAGCACAGAAATTTGGCTAGAGAAGCCGTGAGGAAATCTATGGTCCTTCTGAAAAATGGTGAATCTGCTGATAAGCCTTTATTACCTCTTCCTAAAAAGGTACCAAAAATACTTGTGGCTGGAAGCCATGCAGATAATCTAGGATACCAGTGTGGTGGCTGGACTATAGGATGGCAAGGGGTCAGTGGGAACAATCTTCTCGAAGGGACTACAATTCTCGAGGCTGTGAAAAACACTGTTGATCCTGAAACCAAAGTGGTCTACAAGGAGAACCCTGATGCAGAATTTGTTAAATCCAATGGATTTTCATATGCCATTGTTGTAGTAGGAGAGCATCCTTATGCTGAAACGCATGGTGACAACATGAACTTGGCAATCCCAGACCCTGGTCCTGAGATCATAAGAAACATCTGTGGAGTAACAAAATGTGTAGTTATCGTAATTTCTGGTCGTCCTTTAGTGATTGAACCATATGTTGGTATAATAGATGCACTGGTTGCTGCATGGCTTCCAGGTAGCGAAGGCCAAGGTGTGGCTGATGTTTTATATGGTGACTATGGTTTCACAGGAAAGCTTCCAAGAACATGGTTCAAATCTGTTGATCAACTTCCAATGAATGTTGGAGATCCTCACTATGATCCCCTCTTCCCATTTGGATTTGGCCTTTCTACCCAACCAACTAAGGCCTTGTTCTCCGAGTAG 1911 0.427 MDLDGMAKISMLLVGLCLLLNWAGLLSVDQMKYKDPNQSIDTRVEDLVSRMTLEEKIGQMLQVERKHASAELVKKYFIGSVMSEGGSIPAPQASAETWVDMVNEFQKGAVSTRLGIPMFYGVDAVHGHNTVHNATIFPHNIGLGATREPELVKRIGAATALEVRATGIQYAYAPCIAVCRDPRWGRCYESYSEDTELVQAMTEIIPGLQGDIPDNLPKGVPFIAGKEKVLGCAKHYVGDGGTIDGINEHNTVIDRDGLMKIHMPAYLTSISKGVATIMVSYSSWNGVKMHAHHDLITGFLKNTLHFKGFVISDFEGIDRITSPHRANITYSIEAGVSAGIDMFMFPKLYTEFIDGLSMLVKNNRIPMSRIDDAVRRILWVKFMMGLFENPFADYSLTKYLGIQEHRNLAREAVRKSMVLLKNGESADKPLLPLPKKVPKILVAGSHADNLGYQCGGWTIGWQGVSGNNLLEGTTILEAVKNTVDPETKVVYKENPDAEFVKSNGFSYAIVVVGEHPYAETHGDNMNLAIPDPGPEIIRNICGVTKCVVIVISGRPLVIEPYVGIIDALVAAWLPGSEGQGVADVLYGDYGFTGKLPRTWFKSVDQLPMNVGDPHYDPLFPFGFGLSTQPTKALFSE 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01209 636 FunFam Glycosyl hydrolase family protein 402 628 - -
Phco2g01209 636 Pfam Glycosyl hydrolase family 3 N terminal domain 52 378 IPR001764 GO:0004553|GO:0005975
Phco2g01209 636 Gene3D - 402 628 IPR036881 GO:0004553|GO:0005975
Phco2g01209 636 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 30 632 - -
Phco2g01209 636 SUPERFAMILY (Trans)glycosidases 31 416 IPR017853 -
Phco2g01209 636 Pfam Glycosyl hydrolase family 3 C-terminal domain 417 626 IPR002772 GO:0004553|GO:0005975
Phco2g01209 636 Gene3D - 26 401 IPR036962 GO:0004553|GO:0005975
Phco2g01209 636 PRINTS Glycosyl hydrolase family 3 signature 229 245 IPR001764 GO:0004553|GO:0005975
Phco2g01209 636 PRINTS Glycosyl hydrolase family 3 signature 113 129 IPR001764 GO:0004553|GO:0005975
Phco2g01209 636 PRINTS Glycosyl hydrolase family 3 signature 137 156 IPR001764 GO:0004553|GO:0005975
Phco2g01209 636 PRINTS Glycosyl hydrolase family 3 signature 183 199 IPR001764 GO:0004553|GO:0005975
Phco2g01209 636 PRINTS Glycosyl hydrolase family 3 signature 299 317 IPR001764 GO:0004553|GO:0005975
Phco2g01209 636 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 417 626 IPR036881 GO:0004553|GO:0005975
Phco2g01209 636 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 26 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01209 Phco-Chr2 38542232 38545210 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01209 2 38542232 38545210 Phco2g01209 2 38542232 38545210 ECH