Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01208 ATGGTAGAGGGAAGCTACCGACCCAACTTCAAAATTGAGGAGGTTAGGTGCTTGGCCGTTGCTATCATCCTGAGAGAGAAAGTGGTAGCCAGAGGCATTGAACTTGACCAAAGTAACCTCCTTGTTGAGGCGGAACCAATAGTTACGGCGGTTGTGGACGAAGTTGACAACAACGAGGTAGTTGTTGACAACGAGTGGAAGCGTTCGGAGAAGCACAAGATTAGGATCGAGGAGGAACCCTTGTGGACCATGTACTGCAATAGGAAGAAGAATGGGTACGGCATGGGAAGGGAGGCGACGAAGGAGGACTTGTACGTGATGGAGCTTCTGAATGCAGTGTCGATGGGCATCGACGTTCTTCTATTGAGATCCGAGGTGGAGAAGGGTGGTGGCGGTGGCGAGGGAAGAGAGTTGGCGTACGTGCAATCACCATTCAATCATGAAGTGGGCAATGAGAGGCAACAAGATAGAGAGAGAAATTTGTTTAAGTGCGGATTAAGCAGTGAAAGCACGATGTTTACAAGGGGTGTGAAGGAAATGGCTAAAATCTCCATGTTGTTGGTGGGGATTTGGCTACTAGGTGGCTGGACAGGATTGTTGGATGCAGAATACATGAAGTATAGAGACCCTAAAGAGTCAGTTGATAGTCGGGTTGAGGATCTTGTTAGCAGGATGACTCTTGAGGAGAAAATTGGCCAAATGTTGCAAATTGAACGCAAGTATGCATCTGCTGATTTGGTTAAGAAGTATTTCATTGGGAGTGTAATGAGTGAGGGAGGGAGTATTCCAGCTCCACAGGCTTCTGCTGAAACCTGGATTAACATGGTGAACGAATTTCAGAAGGGTGCTTTATCAACCCGGCTAGGAATTCCAATGTTTTATGGGATTGATGCTGTTCATGGTCACAATAGTGTTTACAAAGCAACTATTTTTCCTCACAATATTGGTCTTGGAGCAACCAGGGACCCTGAATTAGTCAAGAGAATTGGTGCTGCAACTGCCCTTGAAGTTAGAGCAACAGGAATTCAATATGCTTATGCACCTTGTATAGCAGTATGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGTGAGGATCCTAAATTAGTTCAAGTTATGACTGAAATCATACCAGGCTTGCAAGGGGACATTCCTGGCAATTTACCAAAGGGTGTCCCTTTTATCATTGGAAAAGAAAAAGTTCTAGCTTGTGCTAAGCACTACGTGGGTGATGGTGGAACAATCAATGGGATTGATGAGAACAACACTGTTATTGATAGAGATGAATTGATGAAAATTCACATGCCAGCTTACTTCAATTCAATCAGCAAGGGTGTGGCAACCATTATGGTTTCTTACTCCAGTTGGAATGGAGTAAAAATGCATGCTAACCACGAACTTATTACTGGCTTCCTCAAGAATACTCTGCATTTCAAGGGCTTTGTTATTTCAGACTTTGAAGGTATTGATAGGATCACCTCTCCACCTCATTCAAACTTCACTTATTCAGTTGAAGCAGGGGTTTCTGCTGGCATTGACATGTTCATGAATCCAAAGCTTTACATAGAATTCATCAATGATCTAACCATGTTGGTGAAAAATAAGCACATTCCCATGAGTCGAATTGATGATGCAGTGAGAAGAATTTTGTGGGTGAAGTTCATGATGGGTATTTTTGAGAACCCTTTTGCTGATTACAGTTTGGCCAAATATTTGGGAATCCAGGAGCACAGAAATTTGGCTAGAGAAGCTGTGAGGAAATCAATTGTCCTTCTGAAAAATGGTGAATCTGCTGATAAGCCTTTATTGCCACTTCCTAAAAAGGTACCAAAAATACTTGTGGCTGGAAGCCATGCAGATAATCTAGGATATCAGTGTGGTGGCTGGACTATAGAATGGCAAGGGGTCAGTGGGAACAATCTTCTCAAAGGGACTACAATTCTCAATGCTGTGAAAAACACTGTTGATCCTGAAACCAAAGTAGTCTACAAGAAGAACCCTGATGCAGAATTTGTTAAATCCAATGGATTTTCATATGCCATTGTTGTAGTAGGAGAGCATCCTTATGCTGAAATGCATGGTGACAACATGAACTTGACAATCCCAGACTTTGGTCCTGAGACCATAACAAATGTCTGTGGGGCAATAAAATGTGTGGTTATAATAATTTCAGGTCGTCCTTTAGTGATTGAACCATATGTTGGTATCATAGATGCGCTTGTTGCTGGATGGCTTCCAGGTAGCGAAGGCCAAGGTGTGGCTGATGTTTTATATGGTGACTATGGTTTCACAGGAAAGCTTCCAAGAACATGGTTCAAATCTGTTGATCAACTTCCAATGAATGTTGGAGATCCTCACTATGATCCCCTCTTCCCATTTGGATTTGGCCTTTCTACCCAACCAACTAATGGGTTTTACTCTGCCTAG 2433 0.4299 MVEGSYRPNFKIEEVRCLAVAIILREKVVARGIELDQSNLLVEAEPIVTAVVDEVDNNEVVVDNEWKRSEKHKIRIEEEPLWTMYCNRKKNGYGMGREATKEDLYVMELLNAVSMGIDVLLLRSEVEKGGGGGEGRELAYVQSPFNHEVGNERQQDRERNLFKCGLSSESTMFTRGVKEMAKISMLLVGIWLLGGWTGLLDAEYMKYRDPKESVDSRVEDLVSRMTLEEKIGQMLQIERKYASADLVKKYFIGSVMSEGGSIPAPQASAETWINMVNEFQKGALSTRLGIPMFYGIDAVHGHNSVYKATIFPHNIGLGATRDPELVKRIGAATALEVRATGIQYAYAPCIAVCRDPRWGRCYESYSEDPKLVQVMTEIIPGLQGDIPGNLPKGVPFIIGKEKVLACAKHYVGDGGTINGIDENNTVIDRDELMKIHMPAYFNSISKGVATIMVSYSSWNGVKMHANHELITGFLKNTLHFKGFVISDFEGIDRITSPPHSNFTYSVEAGVSAGIDMFMNPKLYIEFINDLTMLVKNKHIPMSRIDDAVRRILWVKFMMGIFENPFADYSLAKYLGIQEHRNLAREAVRKSIVLLKNGESADKPLLPLPKKVPKILVAGSHADNLGYQCGGWTIEWQGVSGNNLLKGTTILNAVKNTVDPETKVVYKKNPDAEFVKSNGFSYAIVVVGEHPYAEMHGDNMNLTIPDFGPETITNVCGAIKCVVIIISGRPLVIEPYVGIIDALVAGWLPGSEGQGVADVLYGDYGFTGKLPRTWFKSVDQLPMNVGDPHYDPLFPFGFGLSTQPTNGFYSA 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01208 810 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 200 575 - -
Phco2g01208 810 FunFam Glycosyl hydrolase family protein 576 802 - -
Phco2g01208 810 Gene3D - 200 575 IPR036962 GO:0004553|GO:0005975
Phco2g01208 810 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 591 800 IPR036881 GO:0004553|GO:0005975
Phco2g01208 810 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 202 804 - -
Phco2g01208 810 Pfam Glycosyl hydrolase family 3 N terminal domain 226 552 IPR001764 GO:0004553|GO:0005975
Phco2g01208 810 PRINTS Glycosyl hydrolase family 3 signature 311 330 IPR001764 GO:0004553|GO:0005975
Phco2g01208 810 PRINTS Glycosyl hydrolase family 3 signature 357 373 IPR001764 GO:0004553|GO:0005975
Phco2g01208 810 PRINTS Glycosyl hydrolase family 3 signature 287 303 IPR001764 GO:0004553|GO:0005975
Phco2g01208 810 PRINTS Glycosyl hydrolase family 3 signature 403 419 IPR001764 GO:0004553|GO:0005975
Phco2g01208 810 PRINTS Glycosyl hydrolase family 3 signature 473 491 IPR001764 GO:0004553|GO:0005975
Phco2g01208 810 Gene3D - 576 802 IPR036881 GO:0004553|GO:0005975
Phco2g01208 810 Pfam Glycosyl hydrolase family 3 C-terminal domain 591 800 IPR002772 GO:0004553|GO:0005975
Phco2g01208 810 SUPERFAMILY (Trans)glycosidases 204 590 IPR017853 -
Phco2g01208 810 Pfam Protein of unknown function, DUF617 39 152 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01208 Phco-Chr2 38470260 38478403 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01208 2 38470260 38478403 Phco2g01208 2 38470260 38478403 ECH