Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01198 ATGCAATCGCACCTTGTGGTGGGATCCATCTCCGTCGCACGCTATGGTGGCGCCGCCGATTCCAGCCCCTTCCACTCCGCCGCACCTTCCTGCTGGGCCAACCCTCCTCGCCGGCGCTCTCCACTCGTCCTGGCCTCCTCCTCGCCCGCTGCCGTCAACGGCGGCCATAATCACTACGCCGTGCTCGGCGTCGCCCGCACTGCCACCGCTGTCGAGATCAAACGCGCTTATCGCCTCCTCGCCCGCAAGTATCATCCCGATGTTAGCAGGGATCCGCATGCTGCCGAATTATTCAAGAGCATCCGTCATGCATATGAAGTACTATCTAATGAAGCAACTAGAGTTCAGTATGATCAAGAACTTCAATTTAGTCACAACTCTCCCAGGGAAAAATGGGGTTACAGTACTGAGTTTGAAGATCAAGTAAGAGTCTATAGATGGGCTCACCTGAGGAAAAAAATGCATAGTGAAAGATACCGGGAGCATTACAATGTCAATGAGGAGTACAGCAGTGAAACAGAGGAAGAAGAAGATGAAGAAAATTTAGGTGAAGAGAGAGGCTCTTTTATTGAAGTGCTTAGATCAGTGTTCTTGTCATTATTTTTGTTTCAGACGTTTGGATCCCGACTCTCTCTTACATTTAGCGGCCTGACAGCATTGTTCGATGAAAAGTTGGACACCGGTTATAAAATTGGTCATGTAATAGCATGGATTTTGGGTGGGAGGGGTGGCATATTGCTAACGTTGTGCTTGTCTTTTGCAAGTTGGGTTTGCGGGAAAACCAGTAGTAGTGTTGTTGCACTAATTGTGGTGGCCATGTGGGTTGGCTCCTACCTCGCAAGGTATGCACCACTTCCCCAAGGTGCTCTATTGGCGCTTCTCTACATGTCCATTAAGCTACAGTCTGACCTAATATAA 918 0.4935 MQSHLVVGSISVARYGGAADSSPFHSAAPSCWANPPRRRSPLVLASSSPAAVNGGHNHYAVLGVARTATAVEIKRAYRLLARKYHPDVSRDPHAAELFKSIRHAYEVLSNEATRVQYDQELQFSHNSPREKWGYSTEFEDQVRVYRWAHLRKKMHSERYREHYNVNEEYSSETEEEEDEENLGEERGSFIEVLRSVFLSLFLFQTFGSRLSLTFSGLTALFDEKLDTGYKIGHVIAWILGGRGGILLTLCLSFASWVCGKTSSSVVALIVVAMWVGSYLARYAPLPQGALLALLYMSIKLQSDLI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01198 305 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Phco2g01198 305 CDD DnaJ 57 110 IPR001623 -
Phco2g01198 305 Gene3D DnaJ domain 55 206 IPR036869 -
Phco2g01198 305 SMART dnaj_3 56 113 IPR001623 -
Phco2g01198 305 ProSiteProfiles dnaJ domain profile. 57 121 IPR001623 -
Phco2g01198 305 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 33 296 - -
Phco2g01198 305 PRINTS DnaJ domain signature 59 77 IPR001623 -
Phco2g01198 305 PRINTS DnaJ domain signature 93 113 IPR001623 -
Phco2g01198 305 PRINTS DnaJ domain signature 77 92 IPR001623 -
Phco2g01198 305 FunFam Uncharacterized protein 54 200 - -
Phco2g01198 305 Pfam DnaJ domain 57 118 IPR001623 -
Phco2g01198 305 SUPERFAMILY Chaperone J-domain 56 124 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01198 Phco-Chr2 38071351 38078416 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01198 2 38071351 38078416 Phco2g01198 2 38071351 38078416 ECH