Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01187 ATGGCCACCGCTTCCCAATCTCAACCCCAGCCACTTCCGCTCCAAGACCGAGTCGCAATCGTCACCGGCTCCTCGCGAGGAATCGGCCGCGAAATCGCGATTCACCTCGCTTCACTCGGTGCGCGAATCGTCATCAATTACACCTCCAACTCGTCCCAAGCCGACTTAGTCGCCGCTCAAATCAACGCCAACTTCGCCTCGCCGCGCGCCGTCGTGGTCCAGGCCGACGTGTCCGAACCGAGCCAAGTCAAGTCCCTCTTTGACTCGGCCGAGCGCGCCTTCGACTCGCCGATCCACATTCTGGTTAACTCGGCGGGCGTCCTCGACGGCACGTACCCCTCCATCGGGAACACCACCGTGGAGTCCTTCGACCGCACCTTCGCGGTGAACACGCGCGGCGCGTTTGCGTGCGCGAGGGAGGCGACGAACCGGTTGAAGCGCGGCGGCGGGGGGCGGATAATCCTGGTCTCGTCGTCGCAGGTGGCGGCGCTGCGGCCGGGATTCGGTGTTTACGCTGCGTCGAAGGCGGCGGTGGAGGCAATGGTGAAGGTGCTGGCGAAGGAGCTGAAGGGAACGCAGATCACGGCGAACTGCGTGGCGCCGGGGCCCATTGCGACAGAGATGTTCTATGAGGGGAAGCCGGAGGAGACTGTGAAAAGGATCGTGCAAGAGTGTCCCTTGGGGAGGCTGGGTGAAGCCAAAGACGTGGCTCCTGTTGTGGGGTTCTTGGCCACTGATGCTTCTGAATGGGTCAATGGTCAAATTGTTCGTGTCAACGGTGGTTATATTTAA 792 0.6187 MATASQSQPQPLPLQDRVAIVTGSSRGIGREIAIHLASLGARIVINYTSNSSQADLVAAQINANFASPRAVVVQADVSEPSQVKSLFDSAERAFDSPIHILVNSAGVLDGTYPSIGNTTVESFDRTFAVNTRGAFACAREATNRLKRGGGGRIILVSSSQVAALRPGFGVYAASKAAVEAMVKVLAKELKGTQITANCVAPGPIATEMFYEGKPEETVKRIVQECPLGRLGEAKDVAPVVGFLATDASEWVNGQIVRVNGGYI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01187 263 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 IPR002347 -
Phco2g01187 263 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 IPR002347 -
Phco2g01187 263 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 IPR002347 -
Phco2g01187 263 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 158 186 IPR020904 GO:0016491
Phco2g01187 263 CDD THN_reductase-like_SDR_c 14 263 - -
Phco2g01187 263 Gene3D - 1 262 - -
Phco2g01187 263 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Phco2g01187 263 PRINTS Glucose/ribitol dehydrogenase family signature 96 107 IPR002347 -
Phco2g01187 263 PRINTS Glucose/ribitol dehydrogenase family signature 226 246 IPR002347 -
Phco2g01187 263 PRINTS Glucose/ribitol dehydrogenase family signature 171 190 IPR002347 -
Phco2g01187 263 PRINTS Glucose/ribitol dehydrogenase family signature 192 209 IPR002347 -
Phco2g01187 263 PRINTS Glucose/ribitol dehydrogenase family signature 145 161 IPR002347 -
Phco2g01187 263 PANTHER NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED 6 261 - -
Phco2g01187 263 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 17 207 - -
Phco2g01187 263 FunFam Short-chain dehydrogenase reductase 4 263 - -
Phco2g01187 263 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 262 IPR036291 -
Phco2g01187 263 Pfam Enoyl-(Acyl carrier protein) reductase 23 262 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01187 2 37854276 37855067 Phco2g01187 2 37854276 37855067 ECH