Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01078 ATGAGTTCCTCTGCAACAGACGATAACCCAAGATCCGTAAAAAGAGTTGCTGTTATTGGTGCTGGGGTAAGTGGGCTTGCTGCCGCTTACAAACTGAAATCACATGGTCTGGATGTCACTGTATTTGAAGCTGAAGGAAGAGCTGGAGGGAGGTTGAGAAGTGTTTCTCGGGATGGTCTAATTTGGGATGAGGGAGCTAATACAATGACTGAAAGTGAAATTGAGGTTAAAGGTCTGATTGATGCTCTTGGACTTCAAGAAAAGCAGCAATTTCCAATATCCCAGCATAAGCGCTATATTGTGAAAAATGGGGCACCGGTGCTGGTACCCACAAATCCTGCTGCACTACTGAAGAGTAAACTACTTTCTGCACAATCAAAGATCCAGGTCATTTTTGAACCATTTTTGTGGAAAAGAAGTGTCCCCTCTAATGTGTGCGATGAAAATTCTGAGGAAAGTGTTAGAAGGTTCTTTCAACGTCATTTTGGGAAAGAGGTTGTGGACTATCTGGTTGATCCTTTTGTTGGAGGCACTAGTGCAACAGATCCTGAATCACTTTCTATGCGCCATTTTTTCCCAGAGTTGTGGAATTTGGAGAAAAGGTTTGGTTCCGTTATTGCTGGGGCATTTCAATCTAAGTTATTTGCCAAAAGGGAAAAAACTGGAGAAAATAAGACTGCACTGAAAAAAAACAAACACAAGCGTGGTTCATTTTCTTTCCAGGGTGGGATGCAGACACTAACAGATACACTGTGCAAAGAGCTTGGGAAAGAGAACCTCAAATTAAATTCAAAGGTTTTGACATTAGCTTATGGTCATGATGAAAGTTCCTCATCACAAAACTGGTCTATTACTTGTGTTTCTAACCAAAGCACCCAAGATGTCGATGCAGTTATCGTTACGGCTCCTCTATGTAATGTCAAGGATATCAAGATTACAAAAAGGAGAGTCCCCTTTCCACTTAATTTTCTTCCCGAGATAAGCTACGTGCCAATCTCAGTCATGATTACTACCTTCAAAAAGGAGAATGTAAAGAGACCATTGGAGGGTTTTGGAGTTCTTGTTCCTTCTAAAGAGAGACAAAATGGTTTTAAAACACTTGGTACACTTTTTTCCTCTATGATGTTTCCAGATCGTGCACCTAGTGATTTTTACCTCTATACTACTTTCGTTGGCGGAACCCAAAACAGGGAACTGGCTCAAGCTTCAACTGATGAACTTCAGAAAATTGTTACTTCTGACCTGAGAAAGTTGTTAGGAGCAGAGGGCGAACCAACATTTGTTAATCATTTTTACTGGAGCAAAGGCTTTCCTTTGTACGGACGTAACTATGGGTCAGTTCTTGAAGCAATTGATAAGATGGAAAAAGATCTTCCTGGAGTTTTCTTTGCTGGTAACTACAAAGGAGGACTCTCAGTTGGAAAATCAATTGCCTCAGGTTGGCAAGCTGCTGATCTTGTAATATCCTACCTCAACTCTGCTTCAGACAACAGTGCCTGA 1500 0.412 MSSSATDDNPRSVKRVAVIGAGVSGLAAAYKLKSHGLDVTVFEAEGRAGGRLRSVSRDGLIWDEGANTMTESEIEVKGLIDALGLQEKQQFPISQHKRYIVKNGAPVLVPTNPAALLKSKLLSAQSKIQVIFEPFLWKRSVPSNVCDENSEESVRRFFQRHFGKEVVDYLVDPFVGGTSATDPESLSMRHFFPELWNLEKRFGSVIAGAFQSKLFAKREKTGENKTALKKNKHKRGSFSFQGGMQTLTDTLCKELGKENLKLNSKVLTLAYGHDESSSSQNWSITCVSNQSTQDVDAVIVTAPLCNVKDIKITKRRVPFPLNFLPEISYVPISVMITTFKKENVKRPLEGFGVLVPSKERQNGFKTLGTLFSSMMFPDRAPSDFYLYTTFVGGTQNRELAQASTDELQKIVTSDLRKLLGAEGEPTFVNHFYWSKGFPLYGRNYGSVLEAIDKMEKDLPGVFFAGNYKGGLSVGKSIASGWQAADLVISYLNSASDNSA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01078 499 Pfam Flavin containing amine oxidoreductase 23 488 IPR002937 GO:0016491
Phco2g01078 499 Gene3D Protoporphyrinogen oxidase, mitochondrial; domain 2 51 440 - -
Phco2g01078 499 PRINTS Adrenodoxin reductase family signature 15 37 - -
Phco2g01078 499 PRINTS Adrenodoxin reductase family signature 38 51 - -
Phco2g01078 499 FunFam Protoporphyrinogen oxidase 109 215 - -
Phco2g01078 499 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 438 - -
Phco2g01078 499 SUPERFAMILY FAD/NAD(P)-binding domain 14 491 IPR036188 -
Phco2g01078 499 PANTHER PROTOPORPHYRINOGEN OXIDASE 13 494 - -
Phco2g01078 499 NCBIfam protoporphyrinogen oxidase 14 492 IPR004572 GO:0004729|GO:0006779
Phco2g01078 499 Gene3D protoporphyrinogen ix oxidase, domain 3 109 215 - -
Phco2g01078 499 Gene3D - 15 484 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01078 Phco-Chr2 17049881 17080682 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01078 2 17049881 17080682 Phco2g01078 2 17049881 17080682 ECH