Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01072 ATGCTTTCATTACAAAAGCATTTTGTCCCCAATTTAACTATTGGTGCTCCAGTTATTGAAAGTTTGAGAAAGCACACAAAGGCATATTTGGATTGCCACCTTATGGTTACAAATCCTCTTGATTATGTTGAACCCTTGGCAAAAGCTGGTGCTTCTGGTTTTACATTTCATGTAGAGGCATCGAAAAATGACTGGAAAGAACTTATCCAAAAAATTAAGTCACATGGCATGAGGCCCGGGGTATCATTAAAGCCTGGGACCCCCATTGAAGAGGTCTTTCCTCTGGTGGAAGCTGAAAATCCTGTGGTAATGGTTCTTGTGATGACTGTAGAACCTGGATTTGGAGGACAAAAGTTTATGCCAGAGATGATGGATAAAGTTCGTATGCTTAGGAAGAAGTATCCATCGCTTGACATTGAGGTTGATGGTGGTTTAGGACCTTCAACTATAGAGGTGGCTGCATCGGCAGGGGCAAATTGCATTGTTGCTGGAAGTTCTGTGTTTGGTGCCCCTGAGCCAGCTCAAGTAATATCCTTGCTGAGGAATTCTGTTGAGAAAGCCCAACAACAAACCTTGATACAGTAA 585 0.4239 MLSLQKHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVEASKNDWKELIQKIKSHGMRPGVSLKPGTPIEEVFPLVEAENPVVMVLVMTVEPGFGGQKFMPEMMDKVRMLRKKYPSLDIEVDGGLGPSTIEVAASAGANCIVAGSSVFGAPEPAQVISLLRNSVEKAQQQTLIQ 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01072 194 Gene3D Aldolase class I 4 191 IPR013785 -
Phco2g01072 194 FunFam Ribulose-phosphate 3-epimerase 1 191 - -
Phco2g01072 194 CDD RPE 7 181 IPR000056 GO:0005975|GO:0016857
Phco2g01072 194 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 105 127 IPR000056 GO:0005975|GO:0016857
Phco2g01072 194 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 5 189 IPR000056 GO:0005975|GO:0016857
Phco2g01072 194 SUPERFAMILY Ribulose-phoshate binding barrel 6 186 IPR011060 -
Phco2g01072 194 Pfam Ribulose-phosphate 3 epimerase family 6 168 IPR000056 GO:0005975|GO:0016857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01072 Phco-Chr2 16711263 16717748 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01072 2 16711263 16717748 Phco2g01072 2 16711263 16717748 ECH