Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01059 ATGACCTATTATGATATGACCAGCAAAAAAGCAATACCTGTCTCAACCGTTAGTGACTTTTGTTTCAGTCATAGTGCGGAAAAGATGAGAGTTGTGGAGTTATCACCCTCAGGTGGAAATGGTTCCTCTACTAATGAAGATGAACCTTTACCTCAGGATGCAGATTATATCAGTGACGAGCTAGAGACTTCAATCTTGGCAAGATTTCCAAGGTCACAGCATTGGAAATTGTGCTTTCTAAACAAGCGGTTCTTGGGGCTAGCGAGGAGTGGCGAGATCTACAAAATCAGGAAGGAGCTGGGACTGAAAGAACCATCTGTGTTTATGTTAGCTAGTGGAGAAAGCAATTGGTGGGGAATGGAGTGGCCTTTCATGTCAAGCAGGAAGCTCCCTCCTATTCAATCAGATTATAATTTTGAGTTTGGAGACAAGGAATCATTCTGTGCTGGATCTCACCTATTAGTCTCAGGCAAGGAGATTGATGGAGCTGTAACTTGGAGGTTTGATTCAAAAAATAATGAATGGCTCAAAGGGCCATCAATGATAAACCCAAGGTGTCTTTTTGCATCAGCCACATCTGGTGCTATTGCTTTTGTTGCTGGGGGTGTTGATGCAACATACACCCAAGTTTTGGATTCTGCTGAGATGTACAACTCTGAAAGCCAGTGTTGGAAGCCCCTACCAAGGATGAACAAAAGGAGGAGGTTTTGCTCAGGTTGCTTCATGGATAACAAGTTCTATGTTCTTGGAGGGAAAGATGAGCATGGGAGGGACCTCACTTGTGGCGAATTCTTTGATGGGAAGACAAACAGTTGGAACTTGATTCCTGATATGTGGAAGGATATTCCTCCTTTTGTTTCACAGTCTCCACCTCTTCTTGCTGTTGTCAACAATGAGTTGTACACACTGGATGCTTCTTCAAATGAGCTGAAAGTGTATATGAAGGGAAGCAATTCATGGAAGACTTTGGGAGTGGTTCCTGTGAGAGCTGATGCACAAAGAGGTTGGGGTGTGGCTTTTAAATCTCTTGGTGATGAGTTGCTTGTGATTGGTGCACCTTCTGTGCCACACAGAGAGCGAGCCATGTGTATGTACACTGGTTCTCCTGATCCTGCTGATGAGAAATTCAGGTGGAGGCAAATTGGATGTAGCAGCATTCAGCTCAATCACTTTATCCGCAATTGTGCTGTGATGTGGACCTGA 1203 0.4406 MTYYDMTSKKAIPVSTVSDFCFSHSAEKMRVVELSPSGGNGSSTNEDEPLPQDADYISDELETSILARFPRSQHWKLCFLNKRFLGLARSGEIYKIRKELGLKEPSVFMLASGESNWWGMEWPFMSSRKLPPIQSDYNFEFGDKESFCAGSHLLVSGKEIDGAVTWRFDSKNNEWLKGPSMINPRCLFASATSGAIAFVAGGVDATYTQVLDSAEMYNSESQCWKPLPRMNKRRRFCSGCFMDNKFYVLGGKDEHGRDLTCGEFFDGKTNSWNLIPDMWKDIPPFVSQSPPLLAVVNNELYTLDASSNELKVYMKGSNSWKTLGVVPVRADAQRGWGVAFKSLGDELLVIGAPSVPHRERAMCMYTGSPDPADEKFRWRQIGCSSIQLNHFIRNCAVMWT 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01059 400 SMART kelc_smart 152 195 IPR006652 GO:0005515
Phco2g01059 400 SMART kelc_smart 196 244 IPR006652 GO:0005515
Phco2g01059 400 Pfam Kelch motif 184 231 IPR006652 GO:0005515
Phco2g01059 400 Pfam Kelch motif 233 278 IPR006652 GO:0005515
Phco2g01059 400 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 56 398 - -
Phco2g01059 400 FunFam F-box/kelch-repeat protein SKIP11 99 383 - -
Phco2g01059 400 SUPERFAMILY Kelch motif 147 353 IPR015915 GO:0005515
Phco2g01059 400 Gene3D - 111 378 IPR015915 GO:0005515
Phco2g01059 400 MobiDBLite consensus disorder prediction 34 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01059 Phco-Chr2 16111974 16113176 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01059 2 16111974 16113176 Phco2g01059 2 16111974 16113176 ECH