Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01003 ATGCCGGAGGAAGAACTAGTTGAGCTCAAGTTTCGTCTCTACGATGGATCCGATATGGGACCCTTCCGTTATTCCCCTGCTTCCACCGTATCTATGCTCAAGGACCGGATTTTTGCAGAGTGGCCCAAAGACAAGAAAATTATACCAAAGGCAGCAAATGATATAAAACTGATAAGTGCTGGCAGAATTTTGGAGAACAACAGAACGGTTGGCCAGTGTAGAGTACCTCTAGGAGTGCTTCCCAAAGGGGTTATTATCACCATGCATGTTGTGGTCCAGCCATCTTTGCTTAAAGCGAAAGCAGAGAAAAAAGTTGATGAGGTGCCCAGAAAACATATATGTGCATGTTCGATTTTTTGTTTGGTGGGATATCCAAAGGACATGGATATGAGTAGCTGGGAAGACAATAATCTGTATAACAGTCCCAACCCCATCATAGTTGAGGGTTGTTGGAGGGCATTCCTGTGTAGCAATGCTTGTCAGTGA 486 0.4444 MPEEELVELKFRLYDGSDMGPFRYSPASTVSMLKDRIFAEWPKDKKIIPKAANDIKLISAGRILENNRTVGQCRVPLGVLPKGVIITMHVVVQPSLLKAKAEKKVDEVPRKHICACSIFCLVGYPKDMDMSSWEDNNLYNSPNPIIVEGCWRAFLCSNACQ 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01003 161 Gene3D - 1 101 - -
Phco2g01003 161 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 117 IPR039540 -
Phco2g01003 161 SUPERFAMILY Ubiquitin-like 2 95 IPR029071 -
Phco2g01003 161 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 118 IPR040015 -
Phco2g01003 161 CDD Ubl_MUBs_plant 6 94 - -
Phco2g01003 161 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01003 Phco-Chr2 13174494 13178074 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01003 2 13174494 13178074 Phco2g01003 2 13174494 13178074 ECH