Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01000 ATGGGTAGCACATTTAATCCACAAATTTTAGTGGAAAAACTAGCCAAGCTGAATGGTTCCCAAACGAGCATAGAGACTTTGTCACATTGGTGTATTTTTCATATGAACAAAGCCAAACAAGTTGTTGAAACATGGGATAGGCAATTTCATGGTTCTCCACGTGAGAAGAGATTGGCATTTCTTTATCTTGCAAATGATATTTTACAGAACAGCAGGCGAAAAGGTTCTGAATTTGTAGGTGAATTCTGGAAGGTTCTTCCAGATGCTCTCCGAGATGTGATTCAAAATGGAGATGATTTTGCTAGGAATGCAGCACTTCGACTGATTGTTATATGGGAAGAGAGGAAAGTCTTTGGTTCTCGTGGTCAAATTCTTAAGGAAGAGTTTGTTGGTAGGAATGTGGAAAACACTAGTCGAGATGTGAAGCCTACAAACATAAAACTGAGGCCATCTTCAGGGAATGCATTGGAGAAAATAGTTTCAGCTTTTCATGTTGTTTATGGAGGGCAAAAAGACGAAGATGCCATATTGAGCAAATGCAGTAATGCCATTAACTGTCTTGACAAAGCAGATAAAGAAATAGTTTCAGGGCAATTTGGTGGATCCGCACTGGTGGATGAGCTCCAGGGGCATAATGCTGTACTGAAGGACTGCATTGAGCAGTTAACAGCCATAGAGTCATCTAGAACTAGTCTCGTGTCTCACTTGAGAGAAGCTCTTGAAGATCAGGAATTCAAGCTGGGTCAAGTCCGTAGCCAGATTCAGGCTGCACATGTACGGTCAGATCGGGCGTCCAACAACTGCCAACAGTTACTTAATGGCAATAACATTCAGTCAATAGCTGAGCAGAGCTCAAAGGAAATTCAAACCTCCATGTCATCTGCAAGTTTTAGTATTTCTCGTGAAAGGGAGCAATCTGCTCCATTAATGTACACACCACAAGTGTCATTTTCTCAGAAATCTGGACAGGTTGAGGAAGATCCACGCAAATCTGCAGCTGCTGCAGTAGCAGCAAAACTGACTGCTTCAACATCCTCCGCGCAGATGCTATCATATGTGCTGTCCTCCCTAGCATCAGAAGGTGTCATAGGCAATCAATCTTCAGCTGATTATCACTCTGAGAAGAGGACCAAGCTCGAGAATGACCAACCATCTTTTATGCCATCTCAGAATCCTCAACAACCACTTCCTCCCTTCTCTCTACCTGAGTCTATTCAACACAATGCTCCTACAACCAACCAGCAATCTACTCCTAATGAACCACCACCTCCACCCTCATCGTCACCTCCTCCATTGCCACCACCACCACCTCCAATATCACAGTACCCTGTGCCGCCGTTCATGCAGACTGCTGGATCCATTAGTAGTATGGCATACAGCTATGGCATGACACAACAGCCGTCAATTGCGGCCTATCCCGTTGTTGGTGCTTCCACTTTTACCCCTCCTCCAATGGGTACATATCAGGGTTTTCAGGGTTCAGATGGAAATTACTATAACCAGCCCTCATCAATGCCTATGGCCCCAATATCTCGACAATAA 1542 0.441 MGSTFNPQILVEKLAKLNGSQTSIETLSHWCIFHMNKAKQVVETWDRQFHGSPREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIQNGDDFARNAALRLIVIWEERKVFGSRGQILKEEFVGRNVENTSRDVKPTNIKLRPSSGNALEKIVSAFHVVYGGQKDEDAILSKCSNAINCLDKADKEIVSGQFGGSALVDELQGHNAVLKDCIEQLTAIESSRTSLVSHLREALEDQEFKLGQVRSQIQAAHVRSDRASNNCQQLLNGNNIQSIAEQSSKEIQTSMSSASFSISREREQSAPLMYTPQVSFSQKSGQVEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNQSSADYHSEKRTKLENDQPSFMPSQNPQQPLPPFSLPESIQHNAPTTNQQSTPNEPPPPPSSSPPPLPPPPPPISQYPVPPFMQTAGSISSMAYSYGMTQQPSIAAYPVVGASTFTPPPMGTYQGFQGSDGNYYNQPSSMPMAPISRQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01000 513 MobiDBLite consensus disorder prediction 367 447 - -
Phco2g01000 513 FunFam ENTH/VHS family protein isoform 1 2 130 - -
Phco2g01000 513 Pfam CID domain 9 120 IPR006569 -
Phco2g01000 513 SMART 558neu5 9 130 IPR006569 -
Phco2g01000 513 Gene3D - 2 129 IPR008942 -
Phco2g01000 513 CDD CID_RPRD_like 7 128 - -
Phco2g01000 513 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 489 - -
Phco2g01000 513 SUPERFAMILY ENTH/VHS domain 12 117 IPR008942 -
Phco2g01000 513 MobiDBLite consensus disorder prediction 477 513 - -
Phco2g01000 513 MobiDBLite consensus disorder prediction 482 513 - -
Phco2g01000 513 MobiDBLite consensus disorder prediction 416 444 - -
Phco2g01000 513 MobiDBLite consensus disorder prediction 400 415 - -
Phco2g01000 513 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01000 Phco-Chr2 13119658 13130817 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01000 2 13119658 13130817 Phco2g01000 2 13119658 13130817 ECH