Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00961 ATGCTCTGCCTCTCCAAGAATCTTCCCTCCTTCTCTCCTCTCTGTATCCAGGTTGAATTCCAGCACTCTTATGCTGATGCTTTGCTTGAAAGGATGGGGTGCACTAACTCTGTTTATAGGAAAAAAAAAACGAGCTTTCCTGAAGTTGTGTTTTTTGTTCCATCAACAAGAATTCCGGTGCAATCTGATCTTCAAAGGGTGCTTAAGGGTGTAATTCCACGGGATCTTGCTGATAAATTGACTTCACTAAGGAATCAGATAGTGTTGGTAGCAGAGGATACTGATGGATCAGCTATAACTGAATTGCGGCGAGCTTTGAATGAATACTTGTCTCTTCTGATTGGACTTACGAAGAAAGAGTATGGTCTTGAAGGGCTAATAGATTTTAAATGGAAAAATTTAGAAGATGGGAAACAAAATAGCAGTGTAGCAAATACCTGGTTTGAGGTGCTATCTGCAGTTCACCTTATGGCTATGCTGACACTGTCTGAGGCTGACTCAATGATGATTCCAAAGGACTCGTCAGGCTCTGGATTCAGGGTTGTATCTTCAGATATCAAGAGGGAAGCAATTGATTTGTTGCTCAAGGCCTCAGGATATCTGGAGTTCTGTTTAAGGGATATTCTTACACGCATACCTCCTGAAATCAGGAATACTTTTCCCCACGACTTACAGGAGGGTGTGTTGGAGGCTATTGCTATTCAAACACTAGGCCAGGGAACTGAGATTCAACTTGGTCTTGCTGTGGAGTGTCAGAAGGCAACTTTGTCTGTGAAGAGGAGATTGGCATGTGAACAGCTGATATACTTTAGTCAGGCTTATCACTGCTTGTTAGGATGCGACACCAACCAAGGGCGTGGAAGGAAGCATCTCCGATTCATCAAATGGAAATTCCTGGAAGCCAAGGCTGCAGCCTACTACTACCATGGTCTGATCCTTGACAAGGGTAATGAACCAAACAGTCCCATTGGTGCTGTGTCTTGTTTTCTTGCTGCAGAAGAGCTTCTGAGTGAAAGCAAGAAGGCCAGCTTAAGCTTTTGCCTTGCAGCTCCAGTTACAAGGGTTCCTCCACTCTGGGGTGCTATGAAATTTCTACACCAGAAAATTCCTGAAGTTGCATCAAGGAAGTCCCAGATGTATGGCTACCTTTGGGAGCAAGAGAAGGGTCTCCGATCATTGCCAGACCTTCCTGAGTTCCAATTATCATTACGTCCAGATGACTATGAACTGCCTGAAATTGACCCAGCATGGGATAGTAGAAACTGGGAATCTCTAGGGCAGCCATTGAAGGAGCACCTTATAGATAGTGATGAGAATCCAACTGATTGA 1329 0.4417 MLCLSKNLPSFSPLCIQVEFQHSYADALLERMGCTNSVYRKKKTSFPEVVFFVPSTRIPVQSDLQRVLKGVIPRDLADKLTSLRNQIVLVAEDTDGSAITELRRALNEYLSLLIGLTKKEYGLEGLIDFKWKNLEDGKQNSSVANTWFEVLSAVHLMAMLTLSEADSMMIPKDSSGSGFRVVSSDIKREAIDLLLKASGYLEFCLRDILTRIPPEIRNTFPHDLQEGVLEAIAIQTLGQGTEIQLGLAVECQKATLSVKRRLACEQLIYFSQAYHCLLGCDTNQGRGRKHLRFIKWKFLEAKAAAYYYHGLILDKGNEPNSPIGAVSCFLAAEELLSESKKASLSFCLAAPVTRVPPLWGAMKFLHQKIPEVASRKSQMYGYLWEQEKGLRSLPDLPEFQLSLRPDDYELPEIDPAWDSRNWESLGQPLKEHLIDSDENPTD 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00961 442 CDD BRO1_Alix_like 42 406 - -
Phco2g00961 442 SMART BRO1_2 50 413 IPR004328 -
Phco2g00961 442 ProSiteProfiles BRO1 domain profile. 36 442 IPR004328 -
Phco2g00961 442 Gene3D alix/aip1 like domains 62 426 IPR038499 -
Phco2g00961 442 PANTHER UNCHARACTERIZED 32 424 IPR038898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00961 Phco-Chr2 12186489 12189679 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00961 2 12186489 12189679 Phco2g00961 2 12186489 12189679 ECH