Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00956 ATGTTGAATTATTTCCCCGACGAGGTAATAGAGCACATATTTGATTACGTGGTGTCACACCGTGACCGGAACGCTTTGTCTTTGGTGTGTAAAAGTTGGTACAGGATAGAGAGGTTTACGAGACAGAGGGTGTTCATAGGGAACTGTTACTCTATCGCTCCGGAGAGGTTGATCCAAAGGTTTCCTGGTCTCAAGTCTTTGACTTTGAAGGGAAAACCTCATTTTGCTGACTTCAGTTTGGTTCCTTACGGTTGGGGTGGCTTTGTGTATCCATGGATTGAGGCTCTGGCCAAGAGAAGAGTTGGGTTGGAGGAGCTTAGGCTCAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCTCGTTCTTTCACAAACTTCAAGTCTTTGGTTCTTGTTAGCTGTGAAGGGTTCACCACCGATGGCCTTGCTGCTGTAGCTGCAAATTGCAGGTATCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAAGATCACAAAGGGCAGTGGCTAAGTTGCTTTCCTGATAGCTGTACATCGCTTGTCTCTCTTAATTTTGCTTGCCTTAAAGGAGAGGTTAGTTTGGGAGCTCTAGAGAGACTTGTGGCCAGGTCTCCTAACCTGAAGAGTTTGAAGCTGAATCGTTCAGTTCCCCTTGATGCCCTGCAAAGGATAATGACACGAGCACCTCAACTAGCAGATTTGGGAATTGGATCATTTGTCCATGATCCGGAATCAGAGGCATACATAAAGCATAAAAACACCATTCTCAAGTGCAAGTCCATAACCAGTTTGTCAGGGCTTTTGGAAGTTGCTCCTCACTGTCTTGCAGCTATATATCCTATTTGCCCAAATTTAACATCCTTAAACTTGAGCTATGCAGCAGGCATTCAGGGCAGTGATCTGGTAAAACTGATTCGCCACTGTGTGAAACTTCAGCGCTTATGGATAATGGATTGCATTGGAGACAAAGGACTTTGTGTTGTAGCCCAGACGTGTACAGATTTGCAGGAATTGAGGGTGTTTCCATCTGTTCCCTTTGGAAATCCAATAGCTGTAACAGAAGTAGGACTTGTTGCAATATCAATGGGTTGCCCAAAGCTTCACTCATTACTCTACTTCTGCCACCAGATGACTAATGCTGCACTCATAACAGTGGCAAAGAACTGCCCCAATTTTATCCGGTTCAGGTTGTGCATCCTTGATGCAACAAAACCTGACCCTGATACAATGCAGCCACTGGACGAAGGTTTCGGTGCAATTGTGCAGTCATGCAGGCGACTGAGGCGCCTATCACTCTCAGGGCAGCTGACTGACCAGGTTTTCCTATACATTGGAATGTATGCTGAGAAGCTTGAAATGCTGTCTATTGCATTTGCTGGGGACAGTGACAAGGGAATGCTGTATGTGTTGAATGGATGCAAGAAACTGAGGAAGCTTGAGATAAGAGATTGCCCTTTCGGTGACATGGCACTTCTGACGGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGCGAAGTGACTGTGGGAGCCTGCAAGTTGCTTGCCAAGAAGATGCCAAGGTTGAATGTGGAGATCTTCAATGAAAATGAGCAAGAAGATTGTAGCCTGGAAGATGGGCAGAGGGTAGAGAAGATGTATTTGTATCGTACATTGGCTGGGAAAAGGAAAGATGCACCAGAATATGTATGGACTCTCTAG 1719 0.4578 MLNYFPDEVIEHIFDYVVSHRDRNALSLVCKSWYRIERFTRQRVFIGNCYSIAPERLIQRFPGLKSLTLKGKPHFADFSLVPYGWGGFVYPWIEALAKRRVGLEELRLKRMVVSDESLELLSRSFTNFKSLVLVSCEGFTTDGLAAVAANCRYLRELDLQENEVEDHKGQWLSCFPDSCTSLVSLNFACLKGEVSLGALERLVARSPNLKSLKLNRSVPLDALQRIMTRAPQLADLGIGSFVHDPESEAYIKHKNTILKCKSITSLSGLLEVAPHCLAAIYPICPNLTSLNLSYAAGIQGSDLVKLIRHCVKLQRLWIMDCIGDKGLCVVAQTCTDLQELRVFPSVPFGNPIAVTEVGLVAISMGCPKLHSLLYFCHQMTNAALITVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGQLTDQVFLYIGMYAEKLEMLSIAFAGDSDKGMLYVLNGCKKLRKLEIRDCPFGDMALLTDVGKYETMRSLWMSSCEVTVGACKLLAKKMPRLNVEIFNENEQEDCSLEDGQRVEKMYLYRTLAGKRKDAPEYVWTL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00956 572 Gene3D Ribonuclease Inhibitor 42 572 IPR032675 -
Phco2g00956 572 FunFam Transport inhibitor response 1 42 572 - -
Phco2g00956 572 SUPERFAMILY RNI-like 17 532 - -
Phco2g00956 572 Pfam Transport inhibitor response 1 protein domain 62 108 IPR041101 -
Phco2g00956 572 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 93 531 - -
Phco2g00956 572 Pfam F-box 4 42 IPR041567 -
Phco2g00956 572 Gene3D - 1 41 - -
Phco2g00956 572 CDD F-box_AtTIR1-like 2 41 - -
Phco2g00956 572 FunFam Transport inhibitor response 1 1 41 - -
Phco2g00956 572 SMART fbox_2 5 46 IPR001810 GO:0005515
Phco2g00956 572 SMART LRR_CC_2 100 124 IPR006553 -
Phco2g00956 572 SMART LRR_CC_2 366 390 IPR006553 -
Phco2g00956 572 SMART LRR_CC_2 310 333 IPR006553 -
Phco2g00956 572 SMART LRR_CC_2 125 150 IPR006553 -
Phco2g00956 572 SMART LRR_CC_2 284 309 IPR006553 -
Phco2g00956 572 SMART LRR_CC_2 426 449 IPR006553 -
Phco2g00956 572 SMART LRR_CC_2 475 500 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00956 Phco-Chr2 12073827 12076268 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00956 2 12073827 12076268 Phco2g00956 2 12073827 12076268 ECH