Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00947 ATGGATTTCTCCGACTCTTCTTCTGGCCGCAACTCTCTCATCCCCTCCTTCCTCTACTCCTCTTCCTCCAAGACGCTTCCTCTTCACCGCATGCTCCACTCCACCGCCATCTCTGCCGCGGCACCCTCGCCACCGCCGGCAAACCTCGATTCCGGATCGCGCGGCCTTATGATTCCCTCTCCCAGCGAGTCACGCAAGATCGAGCTCTACTCGCCCAACTTCTATGCAGCCTGTACTGCCGGGGGAATCCTCAGCTGTGGCCTCACTCACATGGCCGTCACTCCTCTTGACCTTGTCAAGTGTAATATGCAGATCGACCCTGCTAAGTATAAAAACATCTCGTCTGGGTTTGGGGTTTTGCTCAAGGAGCAGGGCTTCAAGGGCTTTTTCCGTGGTTGGGTGCCTACCTTGCTTGGTTACAGTGCCCAGGGTGCTTGCAAATTCGGATTCTATGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGCCCAGAGTATGCGAGCAAGTACAAGACCTTGATCTACCTTGCTGGTTCCGCTTCTGCGGAGGTTATTGCTGACGTTGCACTTTGCCCTTTTGAGGCTGTGAAGGTCCGTGTCCAAACACAGCCTGGTTTTGCTAGGGGTTTGGCTGATGGGCTCCCAAAATTTGTGAAATCTGAAGGAACCTTGGGGCTGTACAAGGGAATAGTGCCTCTGTGGGGACGACAGATTCCATACACAATGATGAAGTTTGCTTCATTTGAGACCATAGTTGAGCTGATCTATAAGCATGCCATTCCTACTCCAAAGAATGAGTGCAGCAAAAGCCTGCAACTCGGTGTCAGTTTTGCTGGTGGATATATTGCTGGTGTGCTTTGTGCAATCGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAATGCTAAAGGAGCAACAGTTGGTGATGCGGTGAAGAAGTTTGGTGTCTGGGGTCTCTTCACCCGCGGTCTTCCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCCCAATGGGGAATATATGATGCTTTCAAAGTCTTTGTTGGGCTGCCAACAACTGGTGGTCCTGCTCCTGCCGCCGCCCCAGCTCCAGCTCCTGGTTCTGAGCTAGTAAAGGCGTAG 1131 0.5137 MDFSDSSSGRNSLIPSFLYSSSSKTLPLHRMLHSTAISAAAPSPPPANLDSGSRGLMIPSPSESRKIELYSPNFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKNISSGFGVLLKEQGFKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKSLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKFGVWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPAPAPGSELVKA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00947 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 254 IPR018108 -
Phco2g00947 376 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 54 361 IPR044677 GO:0005315|GO:1990547
Phco2g00947 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 350 IPR018108 -
Phco2g00947 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 157 IPR018108 -
Phco2g00947 376 Pfam Mitochondrial carrier protein 172 258 IPR018108 -
Phco2g00947 376 Pfam Mitochondrial carrier protein 76 159 IPR018108 -
Phco2g00947 376 FunFam Phosphate carrier protein, mitochondrial 73 351 - -
Phco2g00947 376 Gene3D Mitochondrial carrier domain 73 351 IPR023395 -
Phco2g00947 376 SUPERFAMILY Mitochondrial carrier 75 346 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00947 Phco-Chr2 11927215 11930388 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00947 2 11927215 11930388 Phco2g00947 2 11927215 11930388 ECH
Phco2g00947 2 11927215 11930388 Phco5g01276 5 47400303 47404005 PCT